A systematic analysis of oncogenic gene fusions in primary colon cancer

WP Kloosterman, RRJ Coebergh van den Braak… - Cancer research, 2017 - AACR
Genomic rearrangements that give rise to oncogenic gene fusions can offer actionable
targets for cancer therapy. Here we present a systematic analysis of oncogenic gene fusions …

[HTML][HTML] JAFFAL: detecting fusion genes with long-read transcriptome sequencing

NM Davidson, Y Chen, T Sadras, GL Ryland… - Genome biology, 2022 - Springer
In cancer, fusions are important diagnostic markers and targets for therapy. Long-read
transcriptome sequencing allows the discovery of fusions with their full-length isoform …

[HTML][HTML] Reanalysis of RNA-sequencing data reveals several additional fusion genes with multiple isoforms

S Kangaspeska, S Hultsch, H Edgren, D Nicorici… - PloS one, 2012 - journals.plos.org
RNA-sequencing and tailored bioinformatic methodologies have paved the way for
identification of expressed fusion genes from the chaotic genomes of solid tumors. We have …

Recent advances in cancer fusion transcript detection

R Dorney, BP Dhungel, JEJ Rasko… - Briefings in …, 2023 - academic.oup.com
Extensive investigation of gene fusions in cancer has led to the discovery of novel
biomarkers and therapeutic targets. To date, most studies have neglected chromosomal …

Detection of redundant fusion transcripts as biomarkers or disease-specific therapeutic targets in breast cancer

YW Asmann, BM Necela, KR Kalari, A Hossain… - Cancer research, 2012 - AACR
Fusion genes and fusion gene products are widely employed as biomarkers and therapeutic
targets in hematopoietic cancers, but their applications have yet to be appreciated in solid …

[HTML][HTML] Detection of gene fusions using targeted next-generation sequencing: a comparative evaluation

C Heydt, CB Wölwer, O Velazquez Camacho… - BMC medical …, 2021 - Springer
Background Gene fusions represent promising targets for cancer therapy in lung cancer.
Reliable detection of multiple gene fusions is therefore essential. Methods Five …