[HTML][HTML] Diversity and scale: genetic architecture of 2,068 traits in the VA Million Veteran Program

A Verma, JE Huffman, A Rodriguez, M Conery, M Liu… - medRxiv, 2023 - ncbi.nlm.nih.gov
Genome-wide association studies (GWAS) have underrepresented individuals from non-
European populations, impeding progress in characterizing the genetic architecture and …

Tread lightly interpreting polygenic tests of selection

J Novembre, NH Barton - Genetics, 2018 - academic.oup.com
In this issue of GENETICS, a new method for detecting natural selection on polygenic traits
is developed and applied to several human examples (Racimo et al. 2018). By definition …

Positive natural selection in the human lineage

PC Sabeti, SF Schaffner, B Fry, J Lohmueller, P Varilly… - science, 2006 - science.org
Positive natural selection is the force that drives the increase in prevalence of advantageous
traits, and it has played a central role in our development as a species. Until recently, the …

Causal effects on complex traits are similar for common variants across segments of different continental ancestries within admixed individuals

K Hou, Y Ding, Z Xu, Y Wu, A Bhattacharya, R Mester… - Nature …, 2023 - nature.com
Individuals of admixed ancestries (for example, African Americans) inherit a mosaic of
ancestry segments (local ancestry) originating from multiple continental ancestral …

Genomic signatures of positive selection in humans and the limits of outlier approaches

JL Kelley, J Madeoy, JC Calhoun, W Swanson… - Genome …, 2006 - genome.cshlp.org
Identifying regions of the human genome that have been targets of positive selection will
provide important insights into recent human evolutionary history and may facilitate the …

Estimating heritability and its enrichment in tissue-specific gene sets in admixed populations

Y Luo, X Li, X Wang, S Gazal… - Human molecular …, 2021 - academic.oup.com
It is important to study the genetics of complex traits in diverse populations. Here, we
introduce covariate-adjusted linkage disequilibrium (LD) score regression (cov-LDSC), a …

Natural selection and the distribution of identity-by-descent in the human genome

A Albrechtsen, I Moltke, R Nielsen - Genetics, 2010 - academic.oup.com
There has recently been considerable interest in detecting natural selection in the human
genome. Selection will usually tend to increase identity-by-descent (IBD) among individuals …

Disentangling selection on genetically correlated polygenic traits via whole-genome genealogies

AJ Stern, L Speidel, NA Zaitlen, R Nielsen - The American Journal of …, 2021 - cell.com
We present a full-likelihood method to infer polygenic adaptation from DNA sequence
variation and GWAS summary statistics to quantify recent transient directional selection …

[PDF][PDF] Deep learning in population genetics

K Korfmann, OE Gaggiotti… - Genome Biology and …, 2023 - academic.oup.com
Population genetics is transitioning into a data-driven discipline thanks to the availability of
large-scale genomic data and the need to study increasingly complex evolutionary …

Genomic regions exhibiting positive selection identified from dense genotype data

CS Carlson, DJ Thomas, MA Eberle… - Genome …, 2005 - genome.cshlp.org
The allele frequency spectrum of polymorphisms in DNA sequences can be used to test for
signatures of natural selection that depart from the expected frequency spectrum under the …