Environmental signal integration by a modular AND gate

JC Anderson, CA Voigt, AP Arkin - Molecular systems biology, 2007 - embopress.org
Microorganisms use genetic circuits to integrate environmental information. We have
constructed a synthetic AND gate in the bacterium Escherichia coli that integrates …

Prokaryotic genome regulation: multifactor promoters, multitarget regulators and hierarchic networks

A Ishihama - FEMS microbiology reviews, 2010 - academic.oup.com
The vast majority of experimental data have been accumulated on the transcription
regulation of individual genes within a single model prokaryote, Escherichia coli, which form …

The sequence of spacers between the consensus sequences modulates the strength of prokaryotic promoters

PR Jensen, K Hammer - Applied and environmental microbiology, 1998 - Am Soc Microbiol
We constructed a library of synthetic promoters for Lactococcus lactis in which the known
consensus sequences were kept constant while the sequences of the separating spacers …

[引用][C] Stringent control of bacterial transcription

AI Lamond, AA Travers - Cell, 1985 - Elsevier
When bacterial cells experience starvation caused by limited availability of amino acids or
by exhaustion of their primary carbon source, they halt further growth and make a rapid …

[HTML][HTML] Growth rate-dependent global effects on gene expression in bacteria

S Klumpp, Z Zhang, T Hwa - Cell, 2009 - cell.com
Bacterial gene expression depends not only on specific regulatory mechanisms, but also on
bacterial growth, because important global parameters such as the abundance of RNA …

[HTML][HTML] Lessons from simple marine models on the bacterial regulation of eukaryotic development

A Woznica, N King - Current opinion in microbiology, 2018 - Elsevier
Highlights•Cues from environmental bacteria influence the development of many marine
eukaryotes.•The molecular cues produced by environmental bacteria are structurally …

Unraveling the secret lives of bacteria: use of in vivo expression technology and differential fluorescence induction promoter traps as tools for exploring niche-specific …

H Rediers, PB Rainey, J Vanderleyden… - … and Molecular Biology …, 2005 - Am Soc Microbiol
SUMMARY A major challenge for microbiologists is to elucidate the strategies deployed by
microorganisms to adapt to and thrive in highly complex and dynamic environments. In vitro …

Transcriptional regulators a la carte: engineering new effector specificities in bacterial regulatory proteins

TC Galvão, V De Lorenzo - Current Opinion in Biotechnology, 2006 - Elsevier
For many regulators of bacterial biodegradation pathways, small molecule/effector binding is
the signal for triggering transcriptional activation. Thus, regulation results from a cross-talk …

Impact of genomic technologies on studies of bacterial gene expression

V Rhodius, TK Van Dyk, C Gross… - Annual Reviews in …, 2002 - annualreviews.org
▪ Abstract The ability to simultaneously monitor expression of all genes in any bacterium
whose genome has been sequenced has only recently become available. This requires not …

One-component systems dominate signal transduction in prokaryotes

LE Ulrich, EV Koonin, IB Zhulin - Trends in microbiology, 2005 - cell.com
Two-component systems that link environmental signals to cellular responses are viewed as
the primary mode of signal transduction in prokaryotes. By analyzing information encoded …