Chromatin and RNA maps reveal regulatory long noncoding RNAs in mouse
Discovering and classifying long noncoding RNAs (lncRNAs) across all mammalian tissues
and cell lines remains a major challenge. Previously, mouse lncRNAs were identified using …
and cell lines remains a major challenge. Previously, mouse lncRNAs were identified using …
Comprehensive analysis of long noncoding RNA (lncRNA)-chromatin interactions reveals lncRNA functions dependent on binding diverse regulatory elements
G Zhang, Y Lan, A Xie, J Shi, H Zhao, L Xu… - Journal of Biological …, 2019 - ASBMB
Over the past decade, thousands of long noncoding RNAs (lncRNAs) have been identified,
many of which play crucial roles in normal physiology and human disease. LncRNAs can …
many of which play crucial roles in normal physiology and human disease. LncRNAs can …
ColorCells: a database of expression, classification and functions of lncRNAs in single cells
LL Zheng, JH Xiong, WJ Zheng, JH Wang… - Briefings in …, 2021 - academic.oup.com
Although long noncoding RNAs (lncRNAs) have significant tissue specificity, their
expression and variability in single cells remain unclear. Here, we developed ColorCells …
expression and variability in single cells remain unclear. Here, we developed ColorCells …
Identification and characterization of conserved lncRNAs in human and rat brain
Abstract Background Long noncoding RNAs (lncRNAs) are involved in diverse biological
processes and play an essential role in various human diseases. The number of lncRNAs …
processes and play an essential role in various human diseases. The number of lncRNAs …
Evolutionary annotation of conserved long non-coding RNAs in major mammalian species
DC Bu, HT Luo, F Jiao, SS Fang, CF Tan, ZY Liu… - Science China Life …, 2015 - Springer
Mammalian genomes contain tens of thousands of long non-coding RNAs (lncRNAs) that
have been implicated in diverse biological processes. However, the lncRNA transcriptomes …
have been implicated in diverse biological processes. However, the lncRNA transcriptomes …
Strategies to identify long noncoding RNAs involved in gene regulation
C Lee, N Kikyo - Cell & Bioscience, 2012 - Springer
Long noncoding RNAs (lncRNAs) have been detected in nearly every cell type and found to
be fundamentally involved in many biological processes. The characterization of lncRNAs …
be fundamentally involved in many biological processes. The characterization of lncRNAs …
Single-cell analysis of long non-coding RNAs in the developing human neocortex
Abstract Background Long non-coding RNAs (lncRNAs) comprise a diverse class of
transcripts that can regulate molecular and cellular processes in brain development and …
transcripts that can regulate molecular and cellular processes in brain development and …
Identification and functional analysis of long non-coding RNAs in mouse cleavage stage embryonic development based on single cell transcriptome data
K Zhang, K Huang, Y Luo, S Li - BMC genomics, 2014 - Springer
Abstract Background Long non-coding RNAs (lncRNAs) regulate embryonic development
and cell fate decision in various ways, such as modulation of chromatin modification and …
and cell fate decision in various ways, such as modulation of chromatin modification and …
lncRNAs: linking RNA to chromatin
JL Rinn - Cold Spring Harbor perspectives in biology, 2014 - cshperspectives.cshlp.org
Numerous studies over the past decade have identified increasing numbers of long
noncoding RNAs (lncRNAs) across many organisms. Research since has shown that …
noncoding RNAs (lncRNAs) across many organisms. Research since has shown that …
High temporal resolution RNA-seq time course data reveals widespread synchronous activation between mammalian lncRNAs and neighboring protein-coding genes
The advent of massively parallel sequencing revealed extensive transcription beyond
protein-coding genes, identifying tens of thousands of long noncoding RNAs (lncRNAs) …
protein-coding genes, identifying tens of thousands of long noncoding RNAs (lncRNAs) …