A robust platform for chemical genomics in bacterial systems
While genetic perturbation has been the conventional route to probing bacterial systems,
small molecules are showing great promise as probes for cellular complexity. Indeed …
small molecules are showing great promise as probes for cellular complexity. Indeed …
Systems-level chemical biology to accelerate antibiotic drug discovery
Conspectus Drug-resistant bacterial infections pose an imminent and growing threat to
public health. The discovery and development of new antibiotics of novel chemical class and …
public health. The discovery and development of new antibiotics of novel chemical class and …
[HTML][HTML] Chemical genomic approaches to study model microbes
Recent genome-scale analyses of genetic interactions in model microbes have revealed the
inherent functional organization of the cell as a dense network of highly interconnected …
inherent functional organization of the cell as a dense network of highly interconnected …
[HTML][HTML] Phenotypic landscape of a bacterial cell
The explosion of sequence information in bacteria makes developing high-throughput, cost-
effective approaches to matching genes with phenotypes imperative. Using E. coli as proof …
effective approaches to matching genes with phenotypes imperative. Using E. coli as proof …
High-throughput approaches to understanding gene function and mapping network architecture in bacteria
AR Brochado, A Typas - Current opinion in microbiology, 2013 - Elsevier
Advances in sequencing technology have provided an unprecedented view of bacterial
diversity, along with a daunting number of novel genes. Within this new reality lies the …
diversity, along with a daunting number of novel genes. Within this new reality lies the …
[HTML][HTML] Parallel Mapping of Antibiotic Resistance Alleles in Escherichia coli
Chemical genomics expands our understanding of microbial tolerance to inhibitory
chemicals, but its scope is often limited by the throughput of genome-scale library …
chemicals, but its scope is often limited by the throughput of genome-scale library …
Systematic discovery of drug interaction mechanisms
G Chevereau, T Bollenbach - Molecular systems biology, 2015 - embopress.org
Drug combinations are increasingly important in disease treatments, for combating drug
resistance, and for elucidating fundamental relationships in cell physiology. When drugs are …
resistance, and for elucidating fundamental relationships in cell physiology. When drugs are …
Systems-level antimicrobial drug and drug synergy discovery
T Roemer, C Boone - Nature chemical biology, 2013 - nature.com
Here, we review the'target-centric'genomic strategy to antimicrobial discovery and share our
perspective on identification, validation and prioritization of potential antimicrobial drug …
perspective on identification, validation and prioritization of potential antimicrobial drug …
[HTML][HTML] Chemical probes of Escherichia coli uncovered through chemical-chemical interaction profiling with compounds of known biological activity
While cell-based screens have considerable power in identifying new chemical probes of
biological systems and leads for new drugs, a major challenge to the utility of such …
biological systems and leads for new drugs, a major challenge to the utility of such …
Compatibility of evolutionary responses to constituent antibiotics drive resistance evolution to drug pairs
LJ Jahn, D Simon, M Jensen… - Molecular biology …, 2021 - academic.oup.com
Antibiotic combinations are considered a relevant strategy to tackle the global antibiotic
resistance crisis since they are believed to increase treatment efficacy and reduce …
resistance crisis since they are believed to increase treatment efficacy and reduce …