[HTML][HTML] A relationship matrix including full pedigree and genomic information

A Legarra, I Aguilar, I Misztal - Journal of dairy science, 2009 - Elsevier
Dense molecular markers are being used in genetic evaluation for parts of the population.
This requires a two-step procedure where pseudo-data (for instance, daughter yield …

[HTML][HTML] Genomic and pedigree-based genetic parameters for scarcely recorded traits when some animals are genotyped

RF Veerkamp, HA Mulder, R Thompson… - Journal of dairy …, 2011 - Elsevier
Genetic parameters were estimated using relationships between animals that were based
either on pedigree, 43,011 single nucleotide polymorphisms, or a combination of these …

[HTML][HTML] Genomic inbreeding and relationships among Holsteins, Jerseys, and Brown Swiss

PM VanRaden, KM Olson, GR Wiggans, JB Cole… - Journal of Dairy …, 2011 - Elsevier
Genomic measures of relationship and inbreeding within and across breeds were compared
with pedigree measures using genotypes for 43,385 loci of 25,219 Holsteins, 3,068 Jerseys …

Using the genomic relationship matrix to predict the accuracy of genomic selection

ME Goddard, BJ Hayes… - Journal of animal …, 2011 - Wiley Online Library
Estimated breeding values (EBVs) using data from genetic markers can be predicted using a
genomic relationship matrix, derived from animal's genotypes, and best linear unbiased …

[HTML][HTML] Methods for genomic evaluation of a relatively small genotyped dairy population and effect of genotyped cow information in multiparity analyses

DAL Lourenco, I Misztal, S Tsuruta, I Aguilar… - Journal of dairy …, 2014 - Elsevier
Methods for genomic prediction were evaluated for an Israeli Holstein dairy population of
713,686 cows and 1,305 progeny-tested bulls with genotypes. Inclusion of genotypes of 343 …

[HTML][HTML] Genomic predictions for New Zealand dairy bulls and integration with national genetic evaluation

BL Harris, DL Johnson - Journal of dairy science, 2010 - Elsevier
A method is described for the prediction of breeding values incorporating genomic
information. The first stage involves the prediction of genomic breeding values for genotyped …

[HTML][HTML] Symposium review: Single-step genomic evaluations in dairy cattle

EA Mäntysaari, M Koivula, I Strandén - Journal of dairy science, 2020 - Elsevier
During the last decade, genomic selection has revolutionized dairy cattle breeding. For
example, Nordic dairy cows (Denmark, Finland, and Sweden) born in 2018 were> 90% sired …

[HTML][HTML] Computing procedures for genetic evaluation including phenotypic, full pedigree, and genomic information

I Misztal, A Legarra, I Aguilar - Journal of dairy science, 2009 - Elsevier
Currently, genomic evaluations use multiple-step procedures, which are prone to biases and
errors. A single-step procedure may be applicable when genomic predictions can be …

Efficient computation of the genomic relationship matrix and other matrices used in single‐step evaluation

I Aguilar, I Misztal, A Legarra… - Journal of Animal …, 2011 - Wiley Online Library
Genomic evaluations can be calculated using a unified procedure that combines
phenotypic, pedigree and genomic information. Implementation of such a procedure …

Different genomic relationship matrices for single-step analysis using phenotypic, pedigree and genomic information

S Forni, I Aguilar, I Misztal - Genetics Selection Evolution, 2011 - Springer
Background The incorporation of genomic coefficients into the numerator relationship matrix
allows estimation of breeding values using all phenotypic, pedigree and genomic …