The submicroscopic details of interactions between small molecules and macromolecules,
or between macromolecules themselves (ie, DNA-ligand, protein-ligand, DNA-protein …

Protein–protein and protein–DNA/RNA interactions play a fundamental role in a variety of
biological processes. Determining the complex structures of these interactions is valuable, in …

Most life science processes involve, at the atomic scale, recognition between two molecules.
The prediction of such interactions at the molecular level, by so-called docking software, is a …

Protein: DNA interactions are essential to a range of processes that maintain and express
the information encoded in the genome. Structural modeling is an approach that aims to …

Biomolecules are able to communicate with each other by physical contacts and
interactions. These interactions are mostly captured through experimental methods, such as …

The protein–protein docking algorithm ZDOCK has been challenged for the first time to
predict protein–DNA contacts. The computational approach defined in this study has proven …

Proteins and nucleic acids are essential biological macromolecules for cell life. Indeed,
interactions between proteins and DNA regulate many biological processes such as protein …

Protein-DNA interaction is one of the most important aspects of biology. It is a main step of
gene regulation in all organisms and is a potential target for therapeutic and biotech …

Molecular docking is a widely used and effective structure-based computational strategy for
predicting dynamics between ligands and receptors. Until now the docking software were …

1 Background All genetic information in a cell is stored in its DNA, which provides a highly
stable medium for information storage and retrieval. To make use of this stored information …