Alu-associated enhancement of single nucleotide polymorphisms in the human genome

SK Ng, H Xue - Gene, 2006 - Elsevier
Identifying features shaping the architecture of sequence variations is important for
understanding genome evolution and mapping disease loci. In this study, high-resolution …

Genetic analysis of novel Alu insertion polymorphisms in selected indian populations

S Laybourn, EC Akam, N Cox, P Singh… - American Journal of …, 2016 - Wiley Online Library
Objectives Indian subpopulations (Chenchu, Koya, and Lobana Sikh) were analyzed at the
genetic level for 12 Alu polymorphisms. These markers were then utilized to establish levels …

Comprehensive analysis of Alu-associated diversity on the human sex chromosomes

PA Callinan, DJ Hedges, AH Salem, J Xing, JA Walker… - Gene, 2003 - Elsevier
A comprehensive analysis of the human sex chromosomes was undertaken to assess Alu-
associated human genomic diversity and to identify novel Alu insertion polymorphisms for …

Insights on human evolution: an analysis of Alu insertion polymorphisms

MC Terreros, MA Alfonso-Sánchez, GE Novick… - Journal of human …, 2009 - nature.com
We analyzed the genetic profile of 563 individuals from 12 geographically targeted human
populations from Europe, Asia and Africa using 27 human-specific polymorphic Alu …

Identification of a unique Alu-based polymorphism and its use in human population studies

DH Kass, N Jamison, MM Mayberry, E Tecle - Gene, 2007 - Elsevier
Alu elements represent a family of short interspersed DNA elements (SINEs) found in
primate genomes. These are members of a group of transposable elements that integrate …

Alu repeats increase local recombination rates

DJ Witherspoon, WS Watkins, Y Zhang, J Xing… - BMC genomics, 2009 - Springer
Background Recombination rates vary widely across the human genome, but little of that
variation is correlated with known DNA sequence features. The genome contains more than …

Sequence correlation between neighboring Alu instances suggests post-retrotransposition sequence exchange due to Alu gene conversion

D Zhi - Gene, 2007 - Elsevier
Alu elements constitute 10% of the human genome. Alu mobilization is important in the
evolution of the human genome. While retrotransposition is the primary pathway of Alu …

Alu insertion polymorphism: a new type of marker for human population studies

NT Perna, MA Batzer, PL Deininger, M Stoneking - Human biology, 1992 - JSTOR
A PCR-based method was used to screen 462 individuals from Japan, Papua New Guinea,
Indonesia, and Australia for an Alu family insertion polymorphism. The frequency of this Alu …

Predicting human genes susceptible to genomic instability associated with Alu/Alu-mediated rearrangements

X Song, CR Beck, R Du, IM Campbell… - Genome …, 2018 - genome.cshlp.org
Alu elements, the short interspersed element numbering more than 1 million copies per
human genome, can mediate the formation of copy number variants (CNVs) between …

Sequence Analysis and Characterization of Active Human Alu Subfamilies Based on the 1000 Genomes Pilot Project

MK Konkel, JA Walker, AB Hotard… - Genome biology and …, 2015 - academic.oup.com
The goal of the 1000 Genomes Consortium is to characterize human genome structural
variation (SV), including forms of copy number variations such as deletions, duplications …