Current state and perspectives of fungal DNA barcoding and rapid identification procedures

D Begerow, H Nilsson, M Unterseher… - Applied microbiology and …, 2010 - Springer
Fungal research is experiencing a new wave of methodological improvements that most
probably will boost mycology as profoundly as molecular phylogeny has done during the …

Formal description of sequence-based voucherless Fungi: promises and pitfalls, and how to resolve them

R Lücking, DL Hawksworth - IMA fungus, 2018 - Springer
There is urgent need for a formal nomenclature of sequence-based, voucherless Fungi,
given that environmental sequencing has accumulated more than one billion fungal ITS …

[PDF][PDF] Assessment of fungal diversity in the environment using metagenomics: a decade in review

S Cuadros-Orellana, LR Leite, A Smith… - Fungal Genomics & …, 2013 - researchgate.net
Fungi are ubiquitous inhabitants of soil and aquatic environments, and they establish and
maintain either parasitic or symbiotic relationships with animals and plants. They are major …

Unambiguous identification of fungi: where do we stand and how accurate and precise is fungal DNA barcoding?

R Lücking, MC Aime, B Robbertse, AN Miller… - IMA fungus, 2020 - Springer
True fungi (Fungi) and fungus-like organisms (eg Mycetozoa, Oomycota) constitute the
second largest group of organisms based on global richness estimates, with around 3 …

Diversity and ecology of soil fungal communities: increased understanding through the application of molecular techniques

IC Anderson, JWG Cairney - Environmental microbiology, 2004 - Wiley Online Library
Fungi fulfil a range of important ecological functions, yet current understanding of fungal
biodiversity in soil is limited. Direct DNA extraction from soil, coupled with polymerase chain …

Fungal species concepts in the genomics era

J Xu - Genome, 2020 - cdnsciencepub.com
The 140 000 or so fungal species reported so far are heterogeneously defined based on
varying criteria such as morphological, physiological, mating, and (or) molecular features …

Improving ITS sequence data for identification of plant pathogenic fungi

RH Nilsson, KD Hyde, J Pawłowska, M Ryberg… - Fungal Diversity, 2014 - Springer
Plant pathogenic fungi are a large and diverse assemblage of eukaryotes with substantial
impacts on natural ecosystems and human endeavours. These taxa often have complex and …

Sequence-based classification and identification of Fungi

D Hibbett, K Abarenkov, U Kõljalg, M Öpik, B Chai… - Mycologia, 2016 - Taylor & Francis
Fungal taxonomy and ecology have been revolutionized by the application of molecular
methods and both have increasing connections to genomics and functional biology …

Fungal identification biases in microbiome projects

L Tedersoo, B Lindahl - Environmental microbiology reports, 2016 - Wiley Online Library
Fungi are the key players in ecosystems as well as in plant and human health. High‐
throughput molecular identification of fungi has greatly progressed our understanding about …

Scaling up discovery of hidden diversity in fungi: impacts of barcoding approaches

R Yahr, CL Schoch… - … Transactions of the …, 2016 - royalsocietypublishing.org
The fungal kingdom is a hyperdiverse group of multicellular eukaryotes with profound
impacts on human society and ecosystem function. The challenge of documenting and …