N7‐DNA: Base‐Pairing Properties of N7‐(2′‐Deoxy‐βDerythro‐pentofuranosyl)‐Substituted Adenine, Hypoxanthine, and Guanine in Duplexes with …

F Seela, P Leonard - Helvetica chimica acta, 1998 - Wiley Online Library
Abstract Oligonucleotides containing N 7‐(2′‐deoxy‐β‐d‐erythro‐pentofuranosyl) adenine
(1),‐hypoxanthine (2), and‐guanine (3) were synthesized on solid‐phase using …

DNA containing phenanthroline-and phenanthrene-derived, non-nucleosidic base surrogates

SM Langenegger, R Häner - Tetrahedron letters, 2004 - Elsevier
Simple, non-nucleosidic phenanthroline-and phenanthrene derivatives have been
synthesised and incorporated into oligodeoxynucleotides. Complementary strands …

Synthesis and properties of oligodeoxyribonucleotides containing 4-N-acetylcytosine bases

T Wada, A Kobori, S Kawahara, M Sekine - Tetrahedron letters, 1998 - Elsevier
Oligodeoxyribonucleotides containing 4-N-acetyl-2′-deoxycytidines (ac4dC) were
synthesized by the H-phosphonate method. Thymidine 3′-O-(3, 4-dichloro) phthalate …

Synthesis of Bicyclic 2′-Deoxynucleosides with α-l-ribo- and β-d-xylo-Configurations and Restricted S- and N-Type Conformations

KI Shaikh, S Kumar, L Lundhus, AD Bond… - The Journal of …, 2009 - ACS Publications
Two bicyclic 2′-deoxynucleoside analogues are synthesized in 12 steps each from
thymidine. With a six-membered ring fused to the C3′− C4′ bond and an α-l-ribo-and a β …

A New Method for the Synthesis of Oligodeoxyribonucleotides Containing 4-N-Alkoxycarbonyldeoxycytidine Derivatives and Their Hybridization Properties

A Kobori, K Miyata, M Ushioda, K Seio… - The Journal of Organic …, 2002 - ACS Publications
Oligodeoxyribonucleotides incorporating 4-N-alkoxycarbonyldeoxycytidine derivatives were
synthesized on polystyrene-type ArgoPore resins having a new benzyloxy (diisopropyl) silyl …

Synthesis and Primer Properties of Oligonucleotides Containing 3'-Deoxypsicothymidine Units, Labeled with Fluorescein at the 1'-Position

A Guzaev, E Azhayeva, J Hovinen… - Bioconjugate …, 1994 - ACS Publications
Several analogues of the standard M13 sequencing primer that contain up to five 3'-
deoxypsicothymidines, or one or two such units labeled with fluorescein at the l'-position …

Stable DNA triple helix formation using oligonucleotides containing 2 '-aminoethoxy, 5-propargylamino-U

M Sollogoub, RAJ Darby, B Cuenoud, T Brown… - Biochemistry, 2002 - ACS Publications
We have prepared oligonucleotides containing the novel base analogue 2 '-aminoethoxy, 5-
propargylamino-U in place of thymidine and examined their ability to form intermolecular …

An improved post-synthetic substitution approach for synthesis of oligodeoxynucleotides containing labile 4-substituted thymines

Q Zheng, YZ Xu, PF Swann - Nucleosides, Nucleotides & Nucleic …, 1995 - Taylor & Francis
A simple procedure is described for the preparation of a versatile oligodeoxynucleotide
which contains 4-phenylthiothymidine. This versatile oligomer has been successfully used …

Duplex DNA and DNA–RNA hybrids with parallel strand orientation: 2′-deoxy-2′-fluoroisocytidine, 2′-deoxy-2′-fluoroisoguanosine, and canonical nucleosides …

SA Ingale, P Leonard, QN Tran… - The Journal of Organic …, 2015 - ACS Publications
Oligonucleotides with parallel or antiparallel strand orientation incorporating 2′-fluorinated
2′-deoxyribonucleosides with canonical nucleobases or 2′-deoxy-2′-fluoroisocytidine …

Synthesis of 3 '-3 '-Linked Oligonucleotides Branched by a Pentaerythritol Linker and the Thermal Stabilities of the Triplexes with Single-Stranded DNA or RNA

Y Ueno, A Shibata, A Matsuda, Y Kitade - Bioconjugate chemistry, 2003 - ACS Publications
Synthesis of 3 '-3 '-linked oligonucleotides branched by a pentaerythritol linker is described.
The branched oligonucleotides were synthesized on a DNA/RNA synthesizer using a …