Drug–drug interaction extraction via hierarchical RNNs on sequence and shortest dependency paths
Motivation Adverse events resulting from drug-drug interactions (DDI) pose a serious health
issue. The ability to automatically extract DDIs described in the biomedical literature could …
issue. The ability to automatically extract DDIs described in the biomedical literature could …
Dependency-based long short term memory network for drug-drug interaction extraction
Background Drug-drug interaction extraction (DDI) needs assistance from automated
methods to address the explosively increasing biomedical texts. In recent years, deep neural …
methods to address the explosively increasing biomedical texts. In recent years, deep neural …
Drug‐drug interaction extraction via convolutional neural networks
Drug‐drug interaction (DDI) extraction as a typical relation extraction task in natural
language processing (NLP) has always attracted great attention. Most state‐of‐the‐art DDI …
language processing (NLP) has always attracted great attention. Most state‐of‐the‐art DDI …
Using drug descriptions and molecular structures for drug–drug interaction extraction from literature
Motivation Neural methods to extract drug–drug interactions (DDIs) from literature require a
large number of annotations. In this study, we propose a novel method to effectively utilize …
large number of annotations. In this study, we propose a novel method to effectively utilize …
An attention-based effective neural model for drug-drug interactions extraction
Abstract Background Drug-drug interactions (DDIs) often bring unexpected side effects. The
clinical recognition of DDIs is a crucial issue for both patient safety and healthcare cost …
clinical recognition of DDIs is a crucial issue for both patient safety and healthcare cost …
Extracting drug-drug interactions with attention CNNs
We propose a novel attention mechanism for a Convolutional Neural Network (CNN)-based
Drug-Drug Interaction (DDI) extraction model. CNNs have been shown to have a great …
Drug-Drug Interaction (DDI) extraction model. CNNs have been shown to have a great …
AGCN: Attention-based graph convolutional networks for drug-drug interaction extraction
Extracting drug-drug interaction (DDI) relations is one of the most typical tasks in the field of
biomedical relation extraction. Automatic DDI extraction from the biomedical corpus is …
biomedical relation extraction. Automatic DDI extraction from the biomedical corpus is …
Enhancing drug-drug interaction extraction from texts by molecular structure information
We propose a novel neural method to extract drug-drug interactions (DDIs) from texts using
external drug molecular structure information. We encode textual drug pairs with …
external drug molecular structure information. We encode textual drug pairs with …
Drug-drug interaction extraction via recurrent neural network with multiple attention layers
Drug-drug interaction (DDI) is a vital information when physicians and pharmacists intend to
co-administer two or more drugs. Thus, several DDI databases are constructed to avoid …
co-administer two or more drugs. Thus, several DDI databases are constructed to avoid …
A novel feature-based approach to extract drug–drug interactions from biomedical text
Motivation: Knowledge of drug–drug interactions (DDIs) is crucial for health-care
professionals to avoid adverse effects when co-administering drugs to patients. As most …
professionals to avoid adverse effects when co-administering drugs to patients. As most …