Genetics of complex traits: prediction of phenotype, identification of causal polymorphisms and genetic architecture

ME Goddard, KE Kemper… - … of the Royal …, 2016 - royalsocietypublishing.org
Complex or quantitative traits are important in medicine, agriculture and evolution, yet, until
recently, few of the polymorphisms that cause variation in these traits were known. Genome …

A plethora of pleiotropy across complex traits

PM Visscher, J Yang - Nature genetics, 2016 - nature.com
A new analysis has identified hundreds of loci that are associated with multiple traits or
diseases by comparing genome-wide association study (GWAS) data for 42 complex traits …

Explaining additional genetic variation in complex traits

MR Robinson, NR Wray, PM Visscher - Trends in Genetics, 2014 - cell.com
Genome-wide association studies (GWAS) have provided valuable insights into the genetic
basis of complex traits, discovering> 6000 variants associated with> 500 quantitative traits …

[HTML][HTML] Thinking about the evolution of complex traits in the era of genome-wide association studies

G Sella, NH Barton - Annual review of genomics and human …, 2019 - annualreviews.org
Many traits of interest are highly heritable and genetically complex, meaning that much of
the variation they exhibit arises from differences at numerous loci in the genome. Complex …

Pitfalls of predicting complex traits from SNPs

NR Wray, J Yang, BJ Hayes, AL Price… - Nature Reviews …, 2013 - nature.com
The success of genome-wide association studies (GWASs) has led to increasing interest in
making predictions of complex trait phenotypes, including disease, from genotype data …

Allelic heterogeneity and more detailed analyses of known loci explain additional phenotypic variation and reveal complex patterns of association

AR Wood, DG Hernandez, MA Nalls… - Human molecular …, 2011 - academic.oup.com
The identification of multiple signals at individual loci could explain additional phenotypic
variance ('missing heritability') of common traits, and help identify causal genes. We …

Understanding and predicting complex traits: knowledge from cattle

KE Kemper, ME Goddard - Human molecular genetics, 2012 - academic.oup.com
The genetic architecture of complex traits in cattle includes very large numbers of loci
affecting any given trait. Most of these loci have small effects but occasionally there are loci …

Do molecular markers inform about pleiotropy?

D Gianola, G de los Campos, MA Toro, H Naya… - Genetics, 2015 - academic.oup.com
The availability of dense panels of common single-nucleotide polymorphisms and sequence
variants has facilitated the study of statistical features of the genetic architecture of complex …

[HTML][HTML] Gene set analysis of SNP data: benefits, challenges, and future directions

BL Fridley, JM Biernacka - European Journal of Human Genetics, 2011 - nature.com
The last decade of human genetic research witnessed the completion of hundreds of
genome-wide association studies (GWASs). However, the genetic variants discovered …

[HTML][HTML] The omnigenic model and polygenic prediction of complex traits

I Mathieson - The American Journal of Human Genetics, 2021 - cell.com
The omnigenic model was proposed as a framework to understand the highly polygenic
architecture of complex traits revealed by genome-wide association studies (GWASs). I …