Genomic-enabled prediction models using multi-environment trials to estimate the effect of genotype× environment interaction on prediction accuracy in chickpea

M Roorkiwal, D Jarquin, MK Singh, PM Gaur… - Scientific reports, 2018 - nature.com
Genomic selection (GS) by selecting lines prior to field phenotyping using genotyping data
has the potential to enhance the rate of genetic gains. Genotype× environment (G× E) …

Genome-enabled prediction models for yield related traits in chickpea

M Roorkiwal, A Rathore, RR Das, MK Singh… - Frontiers in plant …, 2016 - frontiersin.org
Genomic selection (GS) unlike marker-assisted backcrossing (MABC) predicts breeding
values of lines using genome-wide marker profiling and allows selection of lines prior to field …

Genomic prediction in pea: effect of marker density and training population size and composition on prediction accuracy

N Tayeh, A Klein, MC Le Paslier, F Jacquin… - Frontiers in Plant …, 2015 - frontiersin.org
Pea is an important food and feed crop and a valuable component of low-input farming
systems. Improving resistance to biotic and abiotic stresses is a major breeding target to …

Use of multiple traits genomic prediction, genotype by environment interactions and spatial effect to improve prediction accuracy in yield data

HY Tsai, F Cericola, V Edriss, JR Andersen, J Orabi… - PloS one, 2020 - journals.plos.org
Genomic selection has been extensively implemented in plant breeding schemes. Genomic
selection incorporates dense genome-wide markers to predict the breeding values for …

Increased genomic prediction accuracy in wheat breeding through spatial adjustment of field trial data

B Lado, I Matus, A Rodriguez, L Inostroza… - G3: Genes …, 2013 - academic.oup.com
In crop breeding, the interest of predicting the performance of candidate cultivars in the field
has increased due to recent advances in molecular breeding technologies. However, the …

Modeling genotype× environment interaction for genomic selection with unbalanced data from a wheat breeding program

B Lado, PG Barrios, M Quincke, P Silva… - Crop …, 2016 - Wiley Online Library
Genomic selection (GS) has successfully been used in plant breeding to improve selection
efficiency and reduce breeding time and cost. However, there is not a clear strategy on how …

Genome‐enabled prediction for sparse testing in multi‐environmental wheat trials

L Crespo‐Herrera, R Howard, HP Piepho… - The plant …, 2021 - Wiley Online Library
Sparse testing in genome‐enabled prediction in plant breeding can be emulated throughout
different line allocations where some lines are observed in all environments (overlap) and …

Enhancing hybrid prediction in pearl millet using genomic and/or multi-environment phenotypic information of inbreds

D Jarquin, R Howard, Z Liang, SK Gupta… - Frontiers in …, 2020 - frontiersin.org
Genomic selection (GS) is an emerging methodology that helps select superior lines among
experimental cultivars in plant breeding programs. It offers the opportunity to increase the …

Comparison of genomic selection models for exploring predictive ability of complex traits in breeding programs

LF Merrick, AH Carter - The Plant Genome, 2021 - Wiley Online Library
Traits with a complex unknown genetic architecture are common in breeding programs.
However, they pose a challenge for selection due to a combination of complex …

Genomic prediction of agronomic traits in wheat using different models and cross-validation designs

TA Haile, S Walkowiak, A N'Diaye, JM Clarke… - Theoretical and Applied …, 2021 - Springer
Key message Genomic predictions across environments and within populations resulted in
moderate to high accuracies but across-population genomic prediction should not be …