Exploring the transcriptome of mycorrhizal interactions
A Kohler, E Tisserant - Advances in Botanical Research, 2014 - Elsevier
The transcriptome is defined as the sum of all transcripts in a given cell, tissue or organ and
can be assessed by different approaches. The most recent ones, microarrays and RNA …
can be assessed by different approaches. The most recent ones, microarrays and RNA …
Spatial co-transcriptomics reveals discrete stages of the arbuscular mycorrhizal symbiosis
The symbiotic interaction of plants with arbuscular mycorrhizal (AM) fungi is ancient and
widespread. Plants provide AM fungi with carbon in exchange for nutrients and water …
widespread. Plants provide AM fungi with carbon in exchange for nutrients and water …
Analysis of mycorrhizal functioning using transcriptomics
M Arlt, D Schwarz, P Franken* - Mycorrhizas-Functional Processes and …, 2009 - Springer
Non-targeted approaches are not based on hypotheses, but screen for molecule pattern
differences in organisms under particular conditions or at certain developmental stages …
differences in organisms under particular conditions or at certain developmental stages …
Systems biology and “omics” tools: a cooperation for next-generation mycorrhizal studies
A Salvioli, P Bonfante - Plant Science, 2013 - Elsevier
Omics tools constitute a powerful means of describing the complexity of plants and soil-
borne microorganisms. Next generation sequencing technologies, coupled with emerging …
borne microorganisms. Next generation sequencing technologies, coupled with emerging …
Development of bioinformatic tools to support EST-sequencing, in silico-and microarray-based transcriptome profiling in mycorrhizal symbioses
The great majority of terrestrial plants enters a beneficial arbuscular mycorrhiza (AM) or
ectomycorrhiza (ECM) symbiosis with soil fungi. In the SPP 1084 “MolMyk: Molecular Basics …
ectomycorrhiza (ECM) symbiosis with soil fungi. In the SPP 1084 “MolMyk: Molecular Basics …
Tapping genomics to unravel ectomycorrhizal symbiosis
Given recent technological advances, we are in a golden era of cell and whole organism
research. With the availability of so many sequenced genomes, and the data that has been …
research. With the availability of so many sequenced genomes, and the data that has been …
Transcriptomics for determining gene expression in symbiotic root-fungus interactions.
P Franken, F Krajinski - 2006 - cabidigitallibrary.org
Plant roots in natural or man-made environments are usually colonized by numerous
different fungi. One can call such forms of coexistence symbioses in a broad sense, which …
different fungi. One can call such forms of coexistence symbioses in a broad sense, which …
Focus on mycorrhizal symbioses
R Balestrini, E Lumini - Applied soil ecology, 2018 - Elsevier
A large proportion of the genetic diversity on Earth is represented by fungi. The true
magnitude of fungal diversity has only recently been appreciated thanks to next-generation …
magnitude of fungal diversity has only recently been appreciated thanks to next-generation …
Large-scale transcriptomics to dissect 2 years of the life of a fungal phytopathogen interacting with its host plant
Abstract Background The fungus Leptosphaeria maculans has an exceptionally long and
complex relationship with its host plant, Brassica napus, during which it switches between …
complex relationship with its host plant, Brassica napus, during which it switches between …
Using molecular biology to study mycorrhizal fungal community ecology: Limits and perspectives
PL Chagnon, LD Bainard - Plant signaling & behavior, 2015 - Taylor & Francis
Molecular tools have progressively replaced morphological approaches to characterize
microbial communities in nature. Arbuscular mycorrhizal (AM) fungi are no exception to this …
microbial communities in nature. Arbuscular mycorrhizal (AM) fungi are no exception to this …