Towards genomic criteria for delineating fungal species

C Gostinčar - Journal of Fungi, 2020 - mdpi.com
The discussion of fungal species delineation has yet to reach a consensus, despite the
advancements in technology, which helped modernise traditional approaches. In particular …

Practical molecular taxonomy of fungi

DM Geiser - Advances in fungal biotechnology for industry …, 2004 - Springer
With fungi increasingly used in industry as sources of bioactive compounds and as agents to
produce such compounds, it is becoming more important that fungal taxonomy be a practical …

Fungal species concepts in the genomics era

J Xu - Genome, 2020 - cdnsciencepub.com
The 140 000 or so fungal species reported so far are heterogeneously defined based on
varying criteria such as morphological, physiological, mating, and (or) molecular features …

Improving taxonomic delimitation of fungal species in the age of genomics and phenomics

A Stengel, KM Stanke, AC Quattrone… - Frontiers in …, 2022 - frontiersin.org
Species concepts have long provided a source of debate among biologists. These lively
debates have been important for reaching consensus on how to communicate across …

Towards a unified paradigm for sequence‐based identification of fungi

U Kõljalg, RH Nilsson, K Abarenkov, L Tedersoo… - 2013 - Wiley Online Library
The nuclear ribosomal internal transcribed spacer (ITS) region is the formal fungal barcode
and in most cases the marker of choice for the exploration of fungal diversity in …

e-Fungi: a data resource for comparative analysis of fungal genomes

C Hedeler, HM Wong, MJ Cornell, I Alam, DM Soanes… - BMC genomics, 2007 - Springer
Background The number of sequenced fungal genomes is ever increasing, with about 200
genomes already fully sequenced or in progress. Only a small percentage of those genomes …

What are fungal species and how to delineate them?

KWT Chethana, IS Manawasinghe, VG Hurdeal… - Fungal Diversity, 2021 - Springer
This is the opening paper in the special issue of Fungal Diversity, which collates the data on
defining species. Defining and recognizing species has long been a controversial issue …

[PDF][PDF] An evaluation of the fungal'morphotype'concept based on ribosomal DNA sequences

DC Lacap, KD Hyde, ECY Liew - Fungal Diversity, 2003 - researchgate.net
In studies of fungal endophyte communities, mycelia sterilia are commonly isolated from
plant substrates and grouped into morphotypes on the basis of cultural characteristics. In …

[HTML][HTML] Fungal species boundaries in the genomics era

DR Matute, VE Sepúlveda - Fungal Genetics and Biology, 2019 - Elsevier
Genomic data has opened new possibilities to understand how organisms change over
time, and could enable the discovery of previously undescribed species. Although taxonomy …

Fungal genomes and genotyping

R Araujo, B Sampaio-Maia - Advances in applied microbiology, 2018 - Elsevier
The availability of complete fungal genomes is expanding rapidly and is offering an
extensive and accurate view of this “kingdom.” The scientific milestone of free access to …