PubChem in 2021: new data content and improved web interfaces

S Kim, J Chen, T Cheng, A Gindulyte, J He… - Nucleic acids …, 2021 - academic.oup.com
Abstract PubChem (https://pubchem. ncbi. nlm. nih. gov) is a popular chemical information
resource that serves the scientific community as well as the general public, with millions of …

PUG-View: programmatic access to chemical annotations integrated in PubChem

S Kim, PA Thiessen, T Cheng, J Zhang… - Journal of …, 2019 - Springer
PubChem is a chemical data repository that provides comprehensive information on various
chemical entities. It contains a wealth of chemical information from hundreds of data …

OSIRIS, an entirely in-house developed drug discovery informatics system

T Sander, J Freyss, M von Korff, JR Reich… - Journal of chemical …, 2009 - ACS Publications
We present OSIRIS, an entirely in-house developed drug discovery informatics system. Its
components cover all information handling aspects from compound synthesis via biological …

A million crystal structures: The whole is greater than the sum of its parts

R Taylor, PA Wood - Chemical reviews, 2019 - ACS Publications
The founding in 1965 of what is now called the Cambridge Structural Database (CSD) has
reaped dividends in numerous and diverse areas of chemical research. Each of the million …

Managing, profiling and analyzing a library of 2.6 million compounds gathered from 32 chemical providers

A Monge, A Arrault, C Marot, L Morin-Allory - Molecular diversity, 2006 - Springer
The data for 3.8 million compounds from structural databases of 32 providers were gathered
and stored in a single chemical database. Duplicates are removed using the IUPAC …

ChemDB: a public database of small molecules and related chemoinformatics resources

J Chen, SJ Swamidass, Y Dou, J Bruand… - Bioinformatics, 2005 - academic.oup.com
Motivation: The development of chemoinformatics has been hampered by the lack of large,
publicly available, comprehensive repositories of molecules, in particular of small …

PubChem 2019 update: improved access to chemical data

S Kim, J Chen, T Cheng, A Gindulyte, J He… - Nucleic acids …, 2019 - academic.oup.com
Abstract PubChem (https://pubchem. ncbi. nlm. nih. gov) is a key chemical information
resource for the biomedical research community. Substantial improvements were made in …

From NWChem to NWChemEx: Evolving with the computational chemistry landscape

K Kowalski, R Bair, NP Bauman, JS Boschen… - Chemical …, 2021 - ACS Publications
Since the advent of the first computers, chemists have been at the forefront of using
computers to understand and solve complex chemical problems. As the hardware and …

Exploiting PubChem for virtual screening

XQS Xie - Expert opinion on drug discovery, 2010 - Taylor & Francis
Importance of the field: PubChem is a public molecular information repository, a scientific
showcase of the National Institutes of Health Roadmap Initiative. The PubChem database …

ACCDB: A collection of chemistry databases for broad computational purposes

P Morgante, R Peverati - Journal of Computational Chemistry, 2019 - Wiley Online Library
The importance of databases of reliable and accurate data in chemistry has substantially
increased in the past two decades. Their main usage is to parametrize electronic structure …