[HTML][HTML] Single-base resolution maps of cultivated and wild rice methylomes and regulatory roles of DNA methylation in plant gene expression
Background DNA methylation plays important biological roles in plants and animals. To
examine the rice genomic methylation landscape and assess its functional significance, we …
examine the rice genomic methylation landscape and assess its functional significance, we …
High-resolution mapping of epigenetic modifications of the rice genome uncovers interplay between DNA methylation, histone methylation, and gene expression
We present high-resolution maps of DNA methylation and H3K4 di-and trimethylation of two
entire chromosomes and two fully sequenced centromeres in rice (Oryza sativa) shoots and …
entire chromosomes and two fully sequenced centromeres in rice (Oryza sativa) shoots and …
Global analysis reveals the crucial roles of DNA methylation during rice seed development
MQ Xing, YJ Zhang, SR Zhou, WY Hu, XT Wu… - Plant …, 2015 - academic.oup.com
Seed development is an important process of reproductive development and consists of
embryo and endosperm development; both comprise several key processes. To determine …
embryo and endosperm development; both comprise several key processes. To determine …
Asymmetric variation in DNA methylation during domestication and de-domestication of rice
S Cao, K Chen, K Lu, S Chen, X Zhang, C Shen… - The Plant …, 2023 - academic.oup.com
Hundreds of plant species have been domesticated to feed human civilization, while some
crops have undergone de-domestication into agricultural weeds, threatening global food …
crops have undergone de-domestication into agricultural weeds, threatening global food …
Transcriptome and methylome interactions in rice hybrids
RK Chodavarapu, S Feng, B Ding… - Proceedings of the …, 2012 - National Acad Sciences
DNA methylation is a heritable epigenetic mark that controls gene expression, is responsive
to environmental stresses, and, in plants, may also play a role in heterosis. To determine the …
to environmental stresses, and, in plants, may also play a role in heterosis. To determine the …
Epigenetic inheritance in rice plants
K Akimoto, H Katakami, HJ Kim, E Ogawa… - Annals of …, 2007 - academic.oup.com
Abstract Background and Aims Epigenetics is defined as mechanisms that regulate gene
expression without base sequence alteration. One molecular basis is considered to be DNA …
expression without base sequence alteration. One molecular basis is considered to be DNA …
Genome‐wide mapping of cytosine methylation revealed dynamic DNA methylation patterns associated with genes and centromeres in rice
We conducted genome‐wide mapping of cytosine methylation using methylcytosine
immunoprecipitation combined with Illumina sequencing. The chromosomal distribution …
immunoprecipitation combined with Illumina sequencing. The chromosomal distribution …
Analysis of chromatin regulators reveals specific features of rice DNA methylation pathways
F Tan, C Zhou, Q Zhou, S Zhou, W Yang… - Plant …, 2016 - academic.oup.com
Plant DNA methylation that occurs at CG, CHG, and CHH sites (H= A, C, or T) is a hallmark
of the repression of repetitive sequences and transposable elements (TE s). The rice (Oryza …
of the repression of repetitive sequences and transposable elements (TE s). The rice (Oryza …
DNA methylation changes detected by methylation-sensitive amplified polymorphism in two contrasting rice genotypes under salt stress
DNA methylation, one of the most important epigenetic phenomena, plays a vital role in
tuning gene expression during plant development as well as in response to environmental …
tuning gene expression during plant development as well as in response to environmental …
[HTML][HTML] Genome-wide high-resolution mapping and functional analysis of DNA methylation in Arabidopsis
Cytosine methylation is important for transposon silencing and epigenetic regulation of
endogenous genes, although the extent to which this DNA modification functions to regulate …
endogenous genes, although the extent to which this DNA modification functions to regulate …
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- asymmetric variation dna methylation
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- gene expression epigenetic modifications
- cytosine methylation genes and centromeres
- gene expression histone methylation
- rice genome histone methylation
- global analysis dna methylation