Genomic prediction for crossbred performance using metafounders

EM van Grevenhof, J Vandenplas… - Journal of animal …, 2019 - academic.oup.com
Future genomic evaluation models to be used routinely in breeding programs for pigs and
poultry need to be able to optimally use information of crossbred (CB) animals to predict …

Genomic evaluation for crossbred performance in a single-step approach with metafounders

T Xiang, OF Christensen, A Legarra - Journal of animal science, 2017 - academic.oup.com
ABSTRACT A single-step genomic BLUP method (ssGBLUP) has been successfully
developed and applied for purebred and crossbred performance in pigs. However, it …

[HTML][HTML] Using genomic selection to improve the accuracy of genomic prediction for multi-populations in pigs

C Yin, P Zhou, Y Wang, Z Yin, Y Liu - animal, 2024 - Elsevier
The size of the reference group is among the most critical determinants of genomic
estimated breeding values (GEBVs) accuracy. However, small-and medium-sized pig farms …

Deregressed EBV as the response variable yield more reliable genomic predictions than traditional EBV in pure-bred pigs

T Ostersen, OF Christensen, M Henryon… - Genetics Selection …, 2011 - Springer
Background Genomic selection can be implemented by a multi-step procedure, which
requires a response variable and a statistical method. For pure-bred pigs, it was …

Crossbreed evaluations in single-step genomic best linear unbiased predictor using adjusted realized relationship matrices

DAL Lourenco, S Tsuruta, BO Fragomeni… - Journal of animal …, 2016 - academic.oup.com
Combining purebreed and crossbreed information is beneficial for genetic evaluation of
some livestock species. Genetic evaluations can use relationships based on genomic …

[HTML][HTML] Metafounder approach for single-step genomic evaluations of Red Dairy cattle

AA Kudinov, EA Mäntysaari, GP Aamand, P Uimari… - Journal of dairy …, 2020 - Elsevier
Single-step genomic BLUP (ssGBLUP) is a powerful approach for breeding value prediction
in populations with a limited number of genotyped animals. However, conflicting genomic …

Accuracy of predicted genomic breeding values in purebred and crossbred pigs

AM Hidalgo, JWM Bastiaansen… - G3: Genes …, 2015 - academic.oup.com
Genomic selection has been widely implemented in dairy cattle breeding when the aim is to
improve performance of purebred animals. In pigs, however, the final product is a crossbred …

Accuracy of genomic prediction of purebreds for cross bred performance in pigs

AM Hidalgo, JWM Bastiaansen… - Journal of Animal …, 2016 - Wiley Online Library
In pig breeding, as the final product is a cross bred (CB) animal, the goal is to increase the
CB performance. This goal requires different strategies for the implementation of genomic …

Effect of selection and selective genotyping for creation of reference on bias and accuracy of genomic prediction

GR Gowane, SH Lee, S Clark… - Journal of Animal …, 2019 - Wiley Online Library
Reference populations for genomic selection usually involve selected individuals, which
may result in biased prediction of estimated genomic breeding values (GEBV). In a …

A breed-of-origin of alleles model that includes crossbred data improves predictive ability for crossbred animals in a multi-breed population

A Guillenea, MS Lund, R Evans, V Boerner… - Genetics Selection …, 2023 - Springer
Background Recently, crossbred animals have begun to be used as parents in the next
generations of dairy and beef cattle systems, which has increased the interest in predicting …