[PDF][PDF] Plant phenomics, from sensors to knowledge
Major improvements in crop yield are needed to keep pace with population growth and
climate change. While plant breeding efforts have greatly benefited from advances in …
climate change. While plant breeding efforts have greatly benefited from advances in …
MIPS PlantsDB: a database framework for comparative plant genome research
T Nussbaumer, MM Martis, SK Roessner… - Nucleic acids …, 2012 - academic.oup.com
The rapidly increasing amount of plant genome (sequence) data enables powerful
comparative analyses and integrative approaches and also requires structured and …
comparative analyses and integrative approaches and also requires structured and …
[PDF][PDF] Unlocking plant metabolic diversity: A (pan)-genomic view
X Zhou, Z Liu - Plant Communications, 2022 - cell.com
Plants produce a remarkable diversity of structurally and functionally diverse natural
chemicals that serve as adaptive compounds throughout their life cycles. However …
chemicals that serve as adaptive compounds throughout their life cycles. However …
Leafing through the genomes of our major crop plants: strategies for capturing unique information
AH Paterson - Nature Reviews Genetics, 2006 - nature.com
Crop plants not only have economic significance, but also comprise important botanical
models for evolution and development. This is reflected by the recent increase in the …
models for evolution and development. This is reflected by the recent increase in the …
MIPSPlantsDB—plant database resource for integrative and comparative plant genome research
M Spannagl, O Noubibou, D Haase… - Nucleic Acids …, 2007 - academic.oup.com
Genome-oriented plant research delivers rapidly increasing amount of plant genome data.
Comprehensive and structured information resources are required to structure and …
Comprehensive and structured information resources are required to structure and …
[HTML][HTML] Genome-wide identification of lineage-specific genes in Arabidopsis, Oryza and Populus
Protein sequences were compared among Arabidopsis, Oryza and Populus to identify
differential gene (DG) sets that are in one but not the other two genomes. The DG sets were …
differential gene (DG) sets that are in one but not the other two genomes. The DG sets were …
The potential of genomics in plant systematics
Next‐generation sequencing (NGS) has revolutionized molecular systematics as well as
population and conservation genetics. It is now possible to obtain enormous amounts of …
population and conservation genetics. It is now possible to obtain enormous amounts of …
[HTML][HTML] Harnessing genebanks: High-throughput phenotyping and genotyping of crop wild relatives and landraces
AJ Cortés, JY Barnaby - Frontiers in Plant Science, 2023 - frontiersin.org
Worldwide genebanks hold phenotypic and genetic novelty useful to increase yield, crop
adaptability, and agrobiodiversity (Tanksley and McCouch, 1997) while buffering crop …
adaptability, and agrobiodiversity (Tanksley and McCouch, 1997) while buffering crop …
[PDF][PDF] A review of pangenome tools and recent studies
GS Vernikos - The pangenome: diversity, dynamics and evolution …, 2020 - library.oapen.org
With the advance of sequencing technologies, the landscape of genomic analysis has been
transformed, by moving from single strain to species (or even higher taxa)-wide genomic …
transformed, by moving from single strain to species (or even higher taxa)-wide genomic …
[HTML][HTML] Maize pan-transcriptome provides novel insights into genome complexity and quantitative trait variation
Gene expression variation largely contributes to phenotypic diversity and constructing pan-
transcriptome is considered necessary for species with complex genomes. However, the …
transcriptome is considered necessary for species with complex genomes. However, the …