[PDF][PDF] H-NS promotes looped domain formation in the bacterial chromosome

MC Noom, WW Navarre, T Oshima, GJL Wuite… - Current Biology, 2007 - cell.com
The bacterial chromosome is organized into loops, which constitute topologically isolated
domains. It is unclear which proteins are responsible for the formation of the topological …

H-NS can facilitate specific DNA-binding by RNA polymerase in AT-rich gene regulatory regions

SS Singh, DC Grainger - PLoS genetics, 2013 - journals.plos.org
Extremely AT-rich DNA sequences present a challenging template for specific recognition by
RNA polymerase. In bacteria, this is because the promoter− 10 hexamer, the major DNA …

Gene Regulation by H-NS as a Function of Growth Conditions Depends on Chromosomal Position in Escherichia coli

E Brambilla, B Sclavi - G3: Genes, Genomes, Genetics, 2015 - academic.oup.com
Cellular adaptation to changing environmental conditions requires the coordinated
regulation of expression of large sets of genes by global regulatory factors such as nucleoid …

Spatial organization of DNA sequences directs the assembly of bacterial chromatin by a nucleoid-associated protein

A Japaridze, S Renevey, P Sobetzko, L Stoliar… - Journal of Biological …, 2017 - ASBMB
Structural differentiation of bacterial chromatin depends on cooperative binding of abundant
nucleoid-associated proteins at numerous genomic DNA sites and stabilization of distinct …

Regulation of HUα and HUβ by CRP and FIS inEscherichia coli

L Claret, J Rouviere-Yaniv - Journal of molecular biology, 1996 - Elsevier
The dimeric histone-like protein HU, one of the most abundant DNA binding proteins
ofEscherichia coli, is encoded by two closely related but unlinked genes, hupAandhupB …

Structure and function of bacterial H-NS protein

DC Grainger - Biochemical society transactions, 2016 - portlandpress.com
The histone-like nucleoid structuring (H-NS) protein is a major component of the folded
chromosome in Escherichia coli and related bacteria. Functions attributed to H-NS include …

Bacterial protein HU dictates the morphology of DNA condensates produced by crowding agents and polyamines

T Sarkar, I Vitoc, I Mukerji, NV Hud - Nucleic acids research, 2007 - academic.oup.com
Controlling the size and shape of DNA condensates is important in vivo and for the
improvement of nonviral gene delivery. Here, we demonstrate that the morphology of DNA …

[HTML][HTML] Archaeal histones, nucleosomes, and transcription initiation

JN Reeve, K Sandman, CJ Daniels - Cell, 1997 - cell.com
The packaging of nuclear DNA by histones into nucleosomes and chromatin is a feature as
definitive of the Eucarya as the nuclear membrane, and determining how eucaryal RNA …

Genomic analysis of DNA binding and gene regulation by homologous nucleoid-associated proteins IHF and HU in Escherichia coli K12

AI Prieto, C Kahramanoglou, RM Ali… - Nucleic acids …, 2012 - academic.oup.com
IHF and HU are two heterodimeric nucleoid-associated proteins (NAP) that belong to the
same protein family but interact differently with the DNA. IHF is a sequence-specific DNA …

Bacterial chromatin

A Travers, G Muskhelishvili - Current opinion in genetics & development, 2005 - Elsevier
Recent studies have revealed that the bacterial nucleoid is a dynamic entity that alters its
overall structure in response to changes in both growth rate and growth phase. These …