Detecting the form of selection from DNA sequence data

SP Otto - Trends in Genetics, 2000 - cell.com
Clues to our evolutionary history lie hidden within DNA sequence data. One of the great
challenges facing population geneticists is to identify and accurately interpret these clues …

Molecular signatures of natural selection

R Nielsen - Annu. Rev. Genet., 2005 - annualreviews.org
There is an increasing interest in detecting genes, or genomic regions, that have been
targeted by natural selection. The interest stems from a basic desire to learn more about …

Hitchhiking mapping–functional genomics from the population genetics perspective

C Schlötterer - Trends in Genetics, 2003 - cell.com
Several statistical tests based on population genetic theory are used to identify genes that
have recently acquired a beneficial mutation. Here, I describe the extension of these tests to …

Statistical methods for detecting natural selection from genomic data

Y Suzuki - Genes & genetic systems, 2010 - jstage.jst.go.jp
In the study of molecular and phenotypic evolution, understanding the relative importance of
random genetic drift and positive selection as the mechanisms for driving divergences …

Detecting natural selection in genomic data

JJ Vitti, SR Grossman, PC Sabeti - Annual review of genetics, 2013 - annualreviews.org
The past fifty years have seen the development and application of numerous statistical
methods to identify genomic regions that appear to be shaped by natural selection. These …

The power of allele frequency comparisons to detect the footprint of selection in natural and experimental situations

CGF De Kovel - Genetics Selection Evolution, 2006 - gse-journal.org
Recently, inter-population comparisons of allele frequencies to detect past selection haven
gained popularity. Data from genome-wide scans are used to detect the number and …

Progress and prospects in mapping recent selection in the genome

KR Thornton, JD Jensen, C Becquet, P Andolfatto - Heredity, 2007 - nature.com
One of the central goals of evolutionary biology is to understand the genetic basis of
adaptive evolution. The availability of nearly complete genome sequences from a variety of …

Detecting positive selection in the genome

TR Booker, BC Jackson, PD Keightley - BMC biology, 2017 - Springer
Population geneticists have long sought to understand the contribution of natural selection
to molecular evolution. A variety of approaches have been proposed that use population …

Joint analysis of demography and selection in population genetics: where do we stand and where could we go?

J Li, H Li, M Jakobsson, SEN Li, PER SjÖDin… - Molecular …, 2012 - Wiley Online Library
Teasing apart the effects of selection and demography on genetic polymorphism remains
one of the major challenges in the analysis of population genomic data. The traditional …

Measuring natural selection on genotypes and phenotypes in the wild

CR Linnen, HE Hoekstra - Cold Spring Harbor Symposia on …, 2009 - symposium.cshlp.org
A complete understanding of the role of natural selection in driving evolutionary change
requires accurate estimates of the strength of selection acting in the wild. Accordingly …