Ten eleven translocation enzymes and 5-hydroxymethylation in mammalian development and cancer

SRM Kinney, S Pradhan - Epigenetic alterations in oncogenesis, 2012 - Springer
Hydroxymethylcytosine (5hmC) is an oxidative product of 5-methylcytosine (5mC), catalyzed
by the ten eleven translocation (TET) family of enzymes. Although 5hmC was discovered …

Loss of 5-hydroxymethylcytosine and ten-eleven translocation 2 protein expression in malignant melanoma

T Gambichler, M Sand, M Skrygan - Melanoma research, 2013 - journals.lww.com
Several research groups have recently reported on markedly reduced levels of 5-
hydroxymethylcytosine (5hmC) in human breast, liver, lung, pancreatic, colon, prostate …

Determination of genomic 5-hydroxymethyl-2'-deoxycytidine in human DNA by capillary electrophoresis with laser induced fluorescence

AM Krais, YJ Park, C Plass, HH Schmeiser - Epigenetics, 2011 - Taylor & Francis
Recent studies reported the presence of 5-hydroxymethylcytosine (5 hmC) as an additional
modification in mammalian genomic DNA. To date, 5 hmC has been detected only in mouse …

Examination of the specificity of DNA methylation profiling techniques towards 5-methylcytosine and 5-hydroxymethylcytosine

SG Jin, S Kadam, GP Pfeifer - Nucleic acids research, 2010 - academic.oup.com
ABSTRACT DNA cytosine-5 methylation is a well-studied epigenetic pathway implicated in
gene expression control and disease pathogenesis. Different technologies have been …

5‐Hydroxymethylcytosine: a new kid on the epigenetic block?

F Matarese, E Carrillo‐de Santa Pau… - Molecular systems …, 2011 - embopress.org
The discovery of the Ten‐Eleven‐Translocation (TET) oxygenases that catalyze the
hydroxylation of 5‐methylcytosine (5mC) to 5‐hydroxymethylcytosine (5hmC) has triggered …

Tissue-specific differences in DNA modifications (5-hydroxymethylcytosine, 5-formylcytosine, 5-carboxylcytosine and 5-hydroxymethyluracil) and their …

D Gackowski, E Zarakowska, M Starczak… - PLoS …, 2015 - journals.plos.org
Background Replication-independent active/enzymatic demethylation may be an important
process in the functioning of somatic cells. The most plausible mechanisms of active 5 …

Selective chemical labeling reveals the genome-wide distribution of 5-hydroxymethylcytosine

CX Song, KE Szulwach, Y Fu, Q Dai, C Yi, X Li… - Nature …, 2011 - nature.com
Abstract In contrast to 5-methylcytosine (5-mC), which has been studied extensively,,, little is
known about 5-hydroxymethylcytosine (5-hmC), a recently identified epigenetic modification …

Divergent mechanisms for enzymatic excision of 5-formylcytosine and 5-carboxylcytosine from DNA

A Maiti, AZ Michelson, CJ Armwood… - Journal of the …, 2013 - ACS Publications
5-Methylcytosine (mC) is an epigenetic mark that impacts transcription, development, and
genome stability, and aberrant DNA methylation contributes to aging and cancer. Active …

Hydrophilic material for the selective enrichment of 5-hydroxymethylcytosine and its liquid chromatography–tandem mass spectrometry detection

Y Tang, JM Chu, W Huang, J Xiong, XW Xing… - Analytical …, 2013 - ACS Publications
5-Methylcytosine (5-mC), an important epigenetic modification involved in development, can
be converted enzymatically to 5-hydroxymethylcytosine (5-hmC). 5-hmC is considered an …

Tet-assisted bisulfite sequencing of 5-hydroxymethylcytosine

M Yu, GC Hon, KE Szulwach, CX Song, P Jin, B Ren… - Nature protocols, 2012 - nature.com
A complete understanding of the potential function of 5-hydroxymethylcytosine (5-hmC), a
DNA cytosine modification in mammalian cells, requires an accurate single-base resolution …