Novel approaches for phylogenetic inference from morphological data and total-evidence dating in squamate reptiles (lizards, snakes, and amphisbaenians)
RA Pyron - Systematic Biology, 2017 - academic.oup.com
Here, I combine previously underutilized models and priors to perform more biologically
realistic phylogenetic inference from morphological data, with an example from squamate …
realistic phylogenetic inference from morphological data, with an example from squamate …
Combining phylogenomics and fossils in higher-level squamate reptile phylogeny: molecular data change the placement of fossil taxa
JJ Wiens, CA Kuczynski, T Townsend… - Systematic …, 2010 - academic.oup.com
Molecular data offer great potential to resolve the phylogeny of living taxa but can molecular
data improve our understanding of relationships of fossil taxa? Simulations suggest that this …
data improve our understanding of relationships of fossil taxa? Simulations suggest that this …
Integrated analyses resolve conflicts over squamate reptile phylogeny and reveal unexpected placements for fossil taxa
Squamate reptiles (lizards and snakes) are a pivotal group whose relationships have
become increasingly controversial. Squamates include> 9000 species, making them the …
become increasingly controversial. Squamates include> 9000 species, making them the …
The accuracy of methods for coding and sampling higher-level taxa for phylogenetic analysis: a simulation study
JJ Wiens - Systematic Biology, 1998 - academic.oup.com
Many phylogenetic analyses, particularly morphological studies, use higher taxa (eg,
genera, families) rather than species as terminal taxa. This general approach requires …
genera, families) rather than species as terminal taxa. This general approach requires …
Combining phylogenomic and supermatrix approaches, and a time-calibrated phylogeny for squamate reptiles (lizards and snakes) based on 52 genes and 4162 …
Y Zheng, JJ Wiens - Molecular phylogenetics and evolution, 2016 - Elsevier
Two common approaches for estimating phylogenies in species-rich groups are to:(i)
sample many loci for few species (eg phylogenomic approach), or (ii) sample many species …
sample many loci for few species (eg phylogenomic approach), or (ii) sample many species …
Interrogating genomic-scale data for Squamata (lizards, snakes, and amphisbaenians) shows no support for key traditional morphological relationships
Genomics is narrowing uncertainty in the phylogenetic structure for many amniote groups.
For one of the most diverse and species-rich groups, the squamate reptiles (lizards, snakes …
For one of the most diverse and species-rich groups, the squamate reptiles (lizards, snakes …
Phylogenetic inference and divergence dating of snakes using molecules, morphology and fossils: new insights into convergent evolution of feeding morphology and …
SM Harrington, TW Reeder - Biological Journal of the Linnean …, 2017 - academic.oup.com
Bayesian divergence time analyses were used to simultaneously infer the phylogenetic
relationships and date the major clades of snakes including several important fossils that …
relationships and date the major clades of snakes including several important fossils that …
Estimating divergence dates and evaluating dating methods using phylogenomic and mitochondrial data in squamate reptiles
Recently, phylogenetics has expanded to routinely include estimation of clade ages in
addition to their relationships. Various dating methods have been used, but their relative …
addition to their relationships. Various dating methods have been used, but their relative …
Not enough skeletons in the closet: collections‐based anatomical research in an age of conservation conscience
CJ Bell, JI Mead - The Anatomical Record, 2014 - Wiley Online Library
The emergence of new technologies and improved computing power helped to introduce a
renewed vitality in morphological research in recent decades. This is especially apparent in …
renewed vitality in morphological research in recent decades. This is especially apparent in …
Noise and biases in genomic data may underlie radically different hypotheses for the position of Iguania within Squamata
N Mongiardino Koch, JA Gauthier - PLoS One, 2018 - journals.plos.org
Squamate reptiles are a major component of vertebrate biodiversity whose crown-clade
traces its origin to a narrow window of time in the Mesozoic during which the main subclades …
traces its origin to a narrow window of time in the Mesozoic during which the main subclades …