Genotype and phenotype data standardization, utilization and integration in the big data era for agricultural sciences
Large-scale genotype and phenotype data have been increasingly generated to identify
genetic markers, understand gene function and evolution and facilitate genomic selection …
genetic markers, understand gene function and evolution and facilitate genomic selection …
Agricultural sciences in the big data era: Genotype and Phenotype Data Standardization, Utilization and Integration
Abstract The Genotype-Phenotype Working Group was established in November 2021 as
part of the AgBioData Consortium (https://www. agbiodata. org) with the goal of identifying …
part of the AgBioData Consortium (https://www. agbiodata. org) with the goal of identifying …
[HTML][HTML] Genome wide association studies and genomic selection for crop improvement in the era of Big Data
The exploitation of the genetic diversity of crops is essential for breeding purposes, as the
identification of useful/beneficial alleles for target traits within plant genetic resources allows …
identification of useful/beneficial alleles for target traits within plant genetic resources allows …
[HTML][HTML] Advances in integrating genomics and bioinformatics in the plant breeding pipeline
With the global human population growing rapidly, agricultural production must increase to
meet crop demand. Improving crops through breeding is a sustainable approach to increase …
meet crop demand. Improving crops through breeding is a sustainable approach to increase …
Big data driven agriculture: big data analytics in plant breeding, genomics, and the use of remote sensing technologies to advance crop productivity
Core Ideas Interdisciplinary efforts in high‐throughput field phenotyping Linking proximal
and remote field phenotyping Cyberinfrastructure for high‐throughput field phenotyping …
and remote field phenotyping Cyberinfrastructure for high‐throughput field phenotyping …
[HTML][HTML] Beyond NGS data sharing for plant ecological resilience and improvement of agronomic traits
Decoding complex plant omics is essential for advancing our understanding of plant biology,
evolution, and breeding as well as for practical applications in agriculture, conservation, and …
evolution, and breeding as well as for practical applications in agriculture, conservation, and …
[HTML][HTML] Analytical and decision support tools for genomics-assisted breeding
To successfully implement genomics-assisted breeding (GAB) in crop improvement
programs, efficient and effective analytical and decision support tools (ADSTs) are 'must …
programs, efficient and effective analytical and decision support tools (ADSTs) are 'must …
[HTML][HTML] Application of genomic big data in plant breeding: Past, present, and future
Plant breeding has a long history of developing new varieties that have ensured the food
security of the human population. During this long journey together with humanity, plant …
security of the human population. During this long journey together with humanity, plant …
[HTML][HTML] AgTC and AgETL: open-source tools to enhance data collection and management for plant science research
L Vargas-Rojas, TC Ting, KM Rainey… - Frontiers in Plant …, 2024 - frontiersin.org
Advancements in phenotyping technology have enabled plant science researchers to gather
large volumes of information from their experiments, especially those that evaluate multiple …
large volumes of information from their experiments, especially those that evaluate multiple …
[HTML][HTML] Genomic data integration tutorial, a plant case study
Background The ongoing evolution of the Next Generation Sequencing (NGS) technologies
has led to the production of genomic data on a massive scale. While tools for genomic data …
has led to the production of genomic data on a massive scale. While tools for genomic data …