The contribution of alu elements to mutagenic DNA double-strand break repair

ME Morales, TB White, VA Streva, CB DeFreece… - PLoS …, 2015 - journals.plos.org
Alu elements make up the largest family of human mobile elements, numbering 1.1 million
copies and comprising 11% of the human genome. As a consequence of evolution and …

Alu elements and DNA double-strand break repair

TB White, ME Morales, PL Deininger - Mobile Genetic Elements, 2015 - Taylor & Francis
Alu elements represent one of the most common sources of homology and homeology in the
human genome. Homeologous recombination between Alu elements represents a major …

Human genomic deletions mediated by recombination between Alu elements

SK Sen, K Han, J Wang, J Lee, H Wang… - The American Journal of …, 2006 - cell.com
Recombination between Alu elements results in genomic deletions associated with many
human genetic disorders. Here, we compare the reference human and chimpanzee …

Alu elements: an intrinsic source of human genome instability

C Ade, AM Roy-Engel, PL Deininger - Current opinion in virology, 2013 - Elsevier
Highlights•New Alu element insertions continue to cause about 0.1% of new human genetic
diseases.•Alu is ancestrally derived from the 7SL RNA and formed a primate-specific SINE …

Alu repeats increase local recombination rates

DJ Witherspoon, WS Watkins, Y Zhang, J Xing… - BMC genomics, 2009 - Springer
Background Recombination rates vary widely across the human genome, but little of that
variation is correlated with known DNA sequence features. The genome contains more than …

[HTML][HTML] Inverted Alu repeats unstable in yeast are excluded from the human genome

KS Lobachev, JE Stenger, OG Kozyreva, J Jurka… - The EMBO …, 2000 - embopress.org
The nearly one million Alu repeats in human chromosomes are a potential threat to genome
integrity. Alus form dense clusters where they frequently appear as inverted repeats, a …

Potential gene conversion and source genes for recently integrated Alu elements

AM Roy, ML Carroll, SV Nguyen, AH Salem… - Genome …, 2000 - genome.cshlp.org
Alu elements comprise> 10% of the human genome. We have used a computational biology
approach to analyze the human genomic DNA sequence databases to determine the impact …

Sequence Analysis and Characterization of Active Human Alu Subfamilies Based on the 1000 Genomes Pilot Project

MK Konkel, JA Walker, AB Hotard… - Genome biology and …, 2015 - academic.oup.com
The goal of the 1000 Genomes Consortium is to characterize human genome structural
variation (SV), including forms of copy number variations such as deletions, duplications …

[HTML][HTML] Structural variation of Alu element and human disease

S Kim, CS Cho, K Han, J Lee - Genomics & informatics, 2016 - ncbi.nlm.nih.gov
Transposable elements are one of major sources to cause genomic instability through
various mechanisms including de novo insertion, insertion-mediated genomic deletion, and …

[HTML][HTML] Chromosomal translocation mechanisms at intronic alu elements in mammalian cells

B Elliott, C Richardson, M Jasin - Molecular cell, 2005 - cell.com
Repetitive elements comprise nearly half of the human genome. Chromosomal
rearrangements involving these elements occur in somatic and germline cells and are …