Real-time observation of transcription initiation and elongation on an endogenous yeast gene

DR Larson, D Zenklusen, B Wu, JA Chao, RH Singer - science, 2011 - science.org
Cellular messenger RNA levels are achieved by the combinatorial complexity of factors
controlling transcription, yet the small number of molecules involved in these pathways …

In vivo dynamics of RNA polymerase II transcription

X Darzacq, Y Shav-Tal, V De Turris, Y Brody… - Nature structural & …, 2007 - nature.com
We imaged transcription in living cells using a locus-specific reporter system, which allowed
precise, single-cell kinetic measurements of promoter binding, initiation and elongation …

Single-Molecule Study of Transcriptional Pausing and Arrest by E. coli RNA Polymerase

R John, n Davenport, GJL Wuite, R Landick… - Science, 2000 - science.org
Using an optical-trap/flow-control video microscopy technique, we followed transcription by
single molecules of Escherichia coli RNA polymerase in real time over long template …

Cooperation between RNA polymerase molecules in transcription elongation

V Epshtein, E Nudler - Science, 2003 - science.org
Transcription elongation is responsible for rapid synthesis of RNA chains of thousands of
nucleotides in vivo. In contrast, a single round of transcription performed in vitro is frequently …

Nucleosomal fluctuations govern the transcription dynamics of RNA polymerase II

C Hodges, L Bintu, L Lubkowska, M Kashlev… - Science, 2009 - science.org
RNA polymerase II (Pol II) must overcome the barriers imposed by nucleosomes during
transcription elongation. We have developed an optical tweezers assay to follow individual …

Concurrent fast and slow cycling of a transcriptional activator at an endogenous promoter

TS Karpova, MJ Kim, C Spriet, K Nalley, TJ Stasevich… - Science, 2008 - science.org
For gene regulation, some transcriptional activators bind periodically to promoters with
either a fast (∼ 1 minute) or a slow (∼ 15 to 90 minutes) cycle. It is uncertain whether the …

Nascent transcript sequencing visualizes transcription at nucleotide resolution

LS Churchman, JS Weissman - Nature, 2011 - nature.com
Recent studies of transcription have revealed a level of complexity not previously
appreciated even a few years ago, both in the intricate use of post-initiation control and the …

Cooperation between translating ribosomes and RNA polymerase in transcription elongation

S Proshkin, AR Rahmouni, A Mironov, E Nudler - Science, 2010 - science.org
During transcription of protein-coding genes, bacterial RNA polymerase (RNAP) is closely
followed by a ribosome that translates the newly synthesized transcript. Our in vivo …

Real-time quantification of single RNA translation dynamics in living cells

T Morisaki, K Lyon, KF DeLuca, JG DeLuca, BP English… - Science, 2016 - science.org
Although messenger RNA (mRNA) translation is a fundamental biological process, it has
never been imaged in real time in vivo with single-molecule precision. To achieve this, we …

Real-time dynamics of RNA polymerase II clustering in live human cells

II Cisse, I Izeddin, SZ Causse, L Boudarene, A Senecal… - Science, 2013 - science.org
Transcription is reported to be spatially compartmentalized in nuclear transcription factories
with clusters of RNA polymerase II (Pol II). However, little is known about when these foci …