[HTML][HTML] SARS-CoV-2 genomic surveillance in Brazil: a systematic review with scientometric analysis

D Menezes, PLC Fonseca, JLF de Araújo, RP Souza - Viruses, 2022 - mdpi.com
Several studies have monitored the SARS-CoV-2 variants in Brazil throughout the
pandemic. Here, we systematically reviewed and conducted a scientometric analysis of the …

[HTML][HTML] Tracking SARS-CoV-2 variants using a rapid typification strategy: a key tool for early detection and spread investigation of Omicron in Argentina

GM Castro, P Sicilia, ML Bolzon, L Lopez… - Frontiers in …, 2022 - frontiersin.org
SARS-CoV-2 variants of concern (VOC) and interest (VOI) present mutations in reference to
the original virus, being more transmissible. We implemented a rapid strategy for the …

[HTML][HTML] Model-based estimation of transmissibility and reinfection of SARS-CoV-2 P. 1 variant

RM Coutinho, FMD Marquitti, LS Ferreira… - Communications …, 2021 - nature.com
Abstract Background The SARS-CoV-2 variant of concern (VOC) P. 1 (Gamma variant)
emerged in the Amazonas State, Brazil, in November 2020. The epidemiological …

[HTML][HTML] Turnover of SARS-CoV-2 lineages shaped the pandemic and enabled the emergence of new variants in the state of Rio de Janeiro, Brazil

R da Silva Francisco Junior, AP Lamarca… - Viruses, 2021 - mdpi.com
In the present study, we provide a retrospective genomic epidemiology analysis of the SARS-
CoV-2 pandemic in the state of Rio de Janeiro, Brazil. We gathered publicly available data …

[HTML][HTML] Tracking the evolution of the SARS-CoV-2 Delta variant of concern: analysis of genetic diversity and selection across the whole viral genome

K Li, S Melnychuk, P Sandstrom, H Ji - Frontiers in Microbiology, 2023 - frontiersin.org
Background Since 2019, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
has diversified extensively, producing five highly virulent lineages designated as variants of …

[HTML][HTML] SARS-CoV-2 variant Delta rapidly displaced variant Alpha in the United States and led to higher viral loads

A Bolze, S Luo, S White, ET Cirulli, D Wyman… - Cell Reports …, 2022 - cell.com
We report on the sequencing of 74,348 SARS-CoV-2 positive samples collected across the
United States and show that the Delta variant, first detected in the United States in March …

[HTML][HTML] Infection with the SARS-CoV-2 delta variant is associated with higher infectious virus loads compared to the alpha variant in both unvaccinated and …

CH Luo, CP Morris, J Sachithanandham, A Amadi… - MedRxiv, 2021 - ncbi.nlm.nih.gov
Background The emerging SARS-CoV-2 variant of concern (VOC) B. 1.6. 17.2 (Delta)
quickly displaced the B. 1.1. 7 (Alpha) and is associated with increases in COVID-19 cases …

Rapid screening method for the detection of SARS-CoV-2 variants of concern

DSY Ong, JGM Koeleman, N Vaessen, S Breijer… - Journal of Clinical …, 2021 - Elsevier
Background Comprehensive and up-to-date monitoring of severe acute respiratory
syndrome coronavirus 2 (SARS-CoV-2) variants of concern (VOC) is crucial as these are …

SARS-CoV-2 Variants of Concern (VOC) alpha, beta, gamma, delta, and omicron coincident with consecutive pandemic waves in Pakistan

A Nasir, UB Aamir, A Kanji, A Samreen, Z Ansar… - medRxiv, 2022 - medrxiv.org
Identification and monitoring of SARS-CoV-2 Variants of Concern/Interest (VOC/VOIs) is
essential to guide public health measures. We report the surveillance of VOCs circulating in …

[HTML][HTML] Predominance of SARS-CoV-2 P. 1 (Gamma) lineage inducing the recent COVID-19 wave in southern Brazil and the finding of an additional S: D614A …

M Demoliner, MS da Silva, JS Gularte… - Infection, Genetics and …, 2021 - Elsevier
Recently, the highest wave of SARS-CoV-2 epidemic occurred since the beginning of the
pandemic in Brazil was registered in Rio Grande do Sul (RS) State, Southern Brazil …