Microbiome analysis among bats describes influences of host phylogeny, life history, physiology and geography

CD Phillips, G Phelan, SE Dowd… - Molecular …, 2012 - Wiley Online Library
Metagenomic methods provide an experimental approach to inform the relationships
between hosts and their microbial inhabitants. Previous studies have provided the …

[HTML][HTML] Agricultural fast food: bats feeding in banana monocultures are heavier but have less diverse gut microbiota

P Alpízar, A Risely, M Tschapka… - Frontiers in Ecology and …, 2021 - frontiersin.org
Habitat alteration for agriculture can negatively affect wildlife physiology and health by
decreasing diet diversity and increasing exposure to agrochemicals for animals foraging in …

[PDF][PDF] Invertebrate systems for hypothesis-driven microbiome research

ILG Newton, KB Sheehan, FJ Lee, MA Horton… - Microbiome Science and …, 2013 - Citeseer
A number of novel, invertebrate systems have emerged as excellent models for the study of
microbiomes. Due to their small size, evolutionary diversity, ease of culture, and–in many …

[HTML][HTML] Bighorn sheep gut microbiomes associate with genetic and spatial structure across a metapopulation

CE Couch, HK Arnold, RS Crowhurst, AE Jolles… - Scientific reports, 2020 - nature.com
Studies in laboratory animals demonstrate important relationships between environment,
host traits, and microbiome composition. However, host-microbiome relationships in natural …

The role of animal hosts in shaping gut microbiome variation

E Maritan, A Quagliariello, E Frago… - … of the Royal …, 2024 - royalsocietypublishing.org
Millions of years of co-evolution between animals and their associated microbial
communities have shaped and diversified the nature of their relationship. Studies continue …

Social convergence of gut microbiomes in vampire bats

K Yarlagadda, I Razik, RS Malhi… - Biology …, 2021 - royalsocietypublishing.org
The 'social microbiome'can fundamentally shape the costs and benefits of group-living, but
understanding social transmission of microbes in free-living animals is challenging due to …

Host, microbiome, and complex space: applying population and landscape genetic approaches to gut microbiome research in wild populations

CE Couch, CW Epps - Journal of Heredity, 2022 - academic.oup.com
In recent years, emerging sequencing technologies and computational tools have driven a
tidal wave of research on host-associated microbiomes, particularly the gut microbiome …

Metagenomic systems biology and metabolic modeling of the human microbiome: from species composition to community assembly rules

R Levy, E Borenstein - Gut Microbes, 2014 - Taylor & Francis
The human microbiome is a key contributor to health and development. Yet little is known
about the ecological forces that are at play in defining the composition of such host …

[HTML][HTML] Predicting microbiome function across space is confounded by strain-level differences and functional redundancy across taxa

EM Barnes, EL Carter, JD Lewis - Frontiers in Microbiology, 2020 - frontiersin.org
Variation in the microbiome among individual organisms may play a critical role in the
relative susceptibility of those organisms to infection, disease, and death. However …

Functional genomic and metagenomic approaches to understanding gut microbiota–animal mutualism

SS Yoon, EK Kim, WJ Lee - Current opinion in microbiology, 2015 - Elsevier
Highlights•Animal gut microbiomes impact diverse aspects of host physiology.•Functional
metagenomics of gut microbiomes validate their in vivo roles within hosts.•Bacterial genes …