Cardiac cell modelling: observations from the heart of the cardiac physiome project
In this manuscript we review the state of cardiac cell modelling in the context of international
initiatives such as the IUPS Physiome and Virtual Physiological Human Projects, which aim …
initiatives such as the IUPS Physiome and Virtual Physiological Human Projects, which aim …
Computational biology of cardiac myocytes: proposed standards for the physiome
Predicting information about human physiology and pathophysiology from genomic data is a
compelling, but unfulfilled goal of post-genomic biology. This is the aim of the so-called …
compelling, but unfulfilled goal of post-genomic biology. This is the aim of the so-called …
The cardiac electrophysiology web lab
Computational modeling of cardiac cellular electrophysiology has a long history, and many
models are now available for different species, cell types, and experimental preparations …
models are now available for different species, cell types, and experimental preparations …
Cell-specific cardiac electrophysiology models
W Groenendaal, FA Ortega… - PLoS computational …, 2015 - journals.plos.org
The traditional cardiac model-building paradigm involves constructing a composite model
using data collected from many cells. Equations are derived for each relevant cellular …
using data collected from many cells. Equations are derived for each relevant cellular …
Cellular cardiac electrophysiology modeling with Chaste and CellML
Chaste is an open-source C++ library for computational biology that has well-developed
cardiac electrophysiology tissue simulation support. In this paper, we introduce the features …
cardiac electrophysiology tissue simulation support. In this paper, we introduce the features …
High-throughput functional curation of cellular electrophysiology models
Effective reuse of a quantitative mathematical model requires not just access to curated
versions of the model equations, but also an understanding of the functional capabilities of …
versions of the model equations, but also an understanding of the functional capabilities of …
Using Physiome standards to couple cellular functions for rat cardiac excitation–contraction
JR Terkildsen, S Niederer, EJ Crampin… - Experimental …, 2008 - Wiley Online Library
Scientific endeavour is reliant upon the extension and reuse of previous knowledge. The
formalization of this process for computational modelling is facilitated by the use of accepted …
formalization of this process for computational modelling is facilitated by the use of accepted …
[HTML][HTML] Variability in cardiac electrophysiology: using experimentally-calibrated populations of models to move beyond the single virtual physiological human …
Physiological variability manifests itself via differences in physiological function between
individuals of the same species, and has crucial implications in disease progression and …
individuals of the same species, and has crucial implications in disease progression and …
Evaluating computational efforts and physiological resolution of mathematical models of cardiac tissue
Computational techniques have significantly advanced our understanding of cardiac
electrophysiology, yet they have predominantly concentrated on averaged models that do …
electrophysiology, yet they have predominantly concentrated on averaged models that do …
From millimeters to micrometers; re-introducing myocytes in models of cardiac electrophysiology
Computational modeling has contributed significantly to present understanding of cardiac
electrophysiology including cardiac conduction, excitation-contraction coupling, and the …
electrophysiology including cardiac conduction, excitation-contraction coupling, and the …