Integrative approaches for species delimitation in Ascomycota
Biodiversity loss from disturbances caused by human activities means that species are
disappearing at an ever increasing rate. The high number of species that have yet to be …
disappearing at an ever increasing rate. The high number of species that have yet to be …
What are fungal species and how to delineate them?
This is the opening paper in the special issue of Fungal Diversity, which collates the data on
defining species. Defining and recognizing species has long been a controversial issue …
defining species. Defining and recognizing species has long been a controversial issue …
The Ascomycota tree of life: a phylum-wide phylogeny clarifies the origin and evolution of fundamental reproductive and ecological traits
Abstract We present a 6-gene, 420-species maximum-likelihood phylogeny of Ascomycota,
the largest phylum of Fungi. This analysis is the most taxonomically complete to date with …
the largest phylum of Fungi. This analysis is the most taxonomically complete to date with …
A phylogenomic analysis of the Ascomycota
B Robbertse, JB Reeves, CL Schoch… - Fungal genetics and …, 2006 - Elsevier
An automated procedure was developed to extract orthologous sequences from fungal
genomes and incorporate them into phylogenomic analyses in a timely and efficient manner …
genomes and incorporate them into phylogenomic analyses in a timely and efficient manner …
The ranking of fungi: a tribute to David L. Hawksworth on his 70th birthday
KD Hyde, SSN Maharachchikumbura, S Hongsanan… - Fungal diversity, 2017 - Springer
The history of assigning ranks to fungi, as well as the relative importance of using
divergence time estimates is reviewed. The paper pays tribute to the major mycological …
divergence time estimates is reviewed. The paper pays tribute to the major mycological …
The numbers of fungi: Contributions from traditional taxonomic studies and challenges of metabarcoding
The global diversity of fungi has been estimated using several different approaches. There is
somewhere between 2–11 million estimated species, but the number of formally described …
somewhere between 2–11 million estimated species, but the number of formally described …
Fungal species concepts in the genomics era
J Xu - Genome, 2020 - cdnsciencepub.com
The 140 000 or so fungal species reported so far are heterogeneously defined based on
varying criteria such as morphological, physiological, mating, and (or) molecular features …
varying criteria such as morphological, physiological, mating, and (or) molecular features …
Improving taxonomic delimitation of fungal species in the age of genomics and phenomics
A Stengel, KM Stanke, AC Quattrone… - Frontiers in …, 2022 - frontiersin.org
Species concepts have long provided a source of debate among biologists. These lively
debates have been important for reaching consensus on how to communicate across …
debates have been important for reaching consensus on how to communicate across …
Assembling the fungal tree of life: progress, classification, and evolution of subcellular traits
Based on an overview of progress in molecular systematics of the true fungi
(Fungi/Eumycota) since 1990, little overlap was found among single‐locus data matrices …
(Fungi/Eumycota) since 1990, little overlap was found among single‐locus data matrices …
[HTML][HTML] Fungal species boundaries in the genomics era
DR Matute, VE Sepúlveda - Fungal Genetics and Biology, 2019 - Elsevier
Genomic data has opened new possibilities to understand how organisms change over
time, and could enable the discovery of previously undescribed species. Although taxonomy …
time, and could enable the discovery of previously undescribed species. Although taxonomy …