Integrative single-cell analysis of transcriptional and epigenetic states in the human adult brain
Detailed characterization of the cell types in the human brain requires scalable experimental
approaches to examine multiple aspects of the molecular state of individual cells, as well as …
approaches to examine multiple aspects of the molecular state of individual cells, as well as …
Single-cell sequencing of brain cell transcriptomes and epigenomes
Single-cell sequencing technologies, including transcriptomic and epigenomic assays, are
transforming our understanding of the cellular building blocks of neural circuits. By directly …
transforming our understanding of the cellular building blocks of neural circuits. By directly …
Droplet-based combinatorial indexing for massive-scale single-cell chromatin accessibility
Recent technical advancements have facilitated the mapping of epigenomes at single-cell
resolution; however, the throughput and quality of these methods have limited their …
resolution; however, the throughput and quality of these methods have limited their …
High-throughput sequencing of the transcriptome and chromatin accessibility in the same cell
Single-cell RNA sequencing can reveal the transcriptional state of cells, yet provides little
insight into the upstream regulatory landscape associated with open or accessible …
insight into the upstream regulatory landscape associated with open or accessible …
Single-cell CUT&Tag profiles histone modifications and transcription factors in complex tissues
In contrast to single-cell approaches for measuring gene expression and DNA accessibility,
single-cell methods for analyzing histone modifications are limited by low sensitivity and …
single-cell methods for analyzing histone modifications are limited by low sensitivity and …
Dissecting cell-type composition and activity-dependent transcriptional state in mammalian brains by massively parallel single-nucleus RNA-seq
Massively parallel single-cell RNA sequencing can precisely resolve cellular diversity in a
high-throughput manner at low cost, but unbiased isolation of intact single cells from …
high-throughput manner at low cost, but unbiased isolation of intact single cells from …
[HTML][HTML] Highly parallel genome-wide expression profiling of individual cells using nanoliter droplets
Cells, the basic units of biological structure and function, vary broadly in type and state.
Single-cell genomics can characterize cell identity and function, but limitations of ease and …
Single-cell genomics can characterize cell identity and function, but limitations of ease and …
Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
To facilitate scalable profiling of single cells, we developed split-pool ligation-based
transcriptome sequencing (SPLiT-seq), a single-cell RNA-seq (scRNA-seq) method that …
transcriptome sequencing (SPLiT-seq), a single-cell RNA-seq (scRNA-seq) method that …
STRT-seq-2i: dual-index 5ʹ single cell and nucleus RNA-seq on an addressable microwell array
Single-cell RNA-seq has become routine for discovering cell types and revealing cellular
diversity, but archived human brain samples still pose a challenge to current high …
diversity, but archived human brain samples still pose a challenge to current high …
Highly sensitive spatial transcriptomics at near-cellular resolution with Slide-seqV2
Measurement of the location of molecules in tissues is essential for understanding tissue
formation and function. Previously, we developed Slide-seq, a technology that enables …
formation and function. Previously, we developed Slide-seq, a technology that enables …