Full-length RNA-seq from single cells using Smart-seq2

S Picelli, OR Faridani, ÅK Björklund, G Winberg… - Nature protocols, 2014 - nature.com
Emerging methods for the accurate quantification of gene expression in individual cells hold
promise for revealing the extent, function and origins of cell-to-cell variability. Different high …

Smart-seq2 for sensitive full-length transcriptome profiling in single cells

S Picelli, ÅK Björklund, OR Faridani, S Sagasser… - Nature …, 2013 - nature.com
Single-cell gene expression analyses hold promise for characterizing cellular heterogeneity,
but current methods compromise on either the coverage, the sensitivity or the throughput …

Single-cell RNA counting at allele and isoform resolution using Smart-seq3

M Hagemann-Jensen, C Ziegenhain, P Chen… - Nature …, 2020 - nature.com
Large-scale sequencing of RNA from individual cells can reveal patterns of gene, isoform
and allelic expression across cell types and states. However, current short-read single-cell …

Full-length single-cell RNA sequencing with smart-seq2

S Picelli - Single Cell Methods: Sequencing and Proteomics, 2019 - Springer
In the last few years single-cell RNA sequencing (scRNA-seq) has enabled the investigation
of cellular heterogeneity at the transcriptional level, the characterization of rare cell types as …

Exponential scaling of single-cell RNA-seq in the past decade

V Svensson, R Vento-Tormo, SA Teichmann - Nature protocols, 2018 - nature.com
Measurement of the transcriptomes of single cells has been feasible for only a few years, but
it has become an extremely popular assay. While many types of analysis can be carried out …

Entering the era of single-cell transcriptomics in biology and medicine

R Sandberg - Nature methods, 2014 - nature.com
Recent technical advances have enabled RNA sequencing (RNA-seq) in single cells.
Exploratory studies have already led to insights into the dynamics of differentiation, cellular …

Quantitative single-cell RNA-seq with unique molecular identifiers

S Islam, A Zeisel, S Joost, G La Manno, P Zajac… - Nature …, 2014 - nature.com
Single-cell RNA sequencing (RNA-seq) is a powerful tool to reveal cellular heterogeneity,
discover new cell types and characterize tumor microevolution. However, losses in cDNA …

Effective detection of variation in single-cell transcriptomes using MATQ-seq

K Sheng, W Cao, Y Niu, Q Deng, C Zong - Nature methods, 2017 - nature.com
The quantification of transcriptional variation in single cells, particularly within the same cell
population, is currently limited by the low sensitivity and high technical noise of single-cell …

Introduction to single‐cell RNA sequencing

TK Olsen, N Baryawno - Current protocols in molecular biology, 2018 - Wiley Online Library
During the last decade, high‐throughput sequencing methods have revolutionized the entire
field of biology. The opportunity to study entire transcriptomes in great detail using RNA …

Single-cell quantification of a broad RNA spectrum reveals unique noncoding patterns associated with cell types and states

A Isakova, N Neff, SR Quake - Proceedings of the National …, 2021 - National Acad Sciences
The ability to interrogate total RNA content of single cells would enable better mapping of
the transcriptional logic behind emerging cell types and states. However, current single-cell …