Underestimated effect of intragenic HIV-1 DNA methylation on viral transcription in infected individuals

S Kint, W Trypsteen, W De Spiegelaere… - Clinical …, 2020 - Springer
Background The HIV-1 proviral genome harbors multiple CpG islands (CpGIs), both in the
promoter and intragenic regions. DNA methylation in the promoter region has been shown …

Development of 5 'LTR DNA methylation of latent HIV-1 provirus in cell line models and in long-term-infected individuals

K Trejbalová, D Kovářová, J Blažková, L Machala… - Clinical …, 2016 - Springer
Background Human immunodeficiency virus type 1 (HIV-1) latency represents the major
barrier to virus eradication in infected individuals because cells harboring latent HIV-1 …

Challenges in quantifying cytosine methylation in the HIV provirus

SA LaMere, A Chaillon, C Huynh, DM Smith, S Gianella - MBio, 2019 - Am Soc Microbiol
ABSTRACT DNA methylation is an epigenetic mechanism most commonly associated with
transcriptional repression. While it is clear that DNA methylation can silence HIV proviral …

Deciphering DNA methylation in HIV infection

T Arumugam, U Ramphal, T Adimulam… - Frontiers in …, 2021 - frontiersin.org
With approximately 38 million people living with HIV/AIDS globally, and a further 1.5 million
new global infections per year, it is imperative that we advance our understanding of all …

[HTML][HTML] Epigenetic analysis of HIV-1 proviral genomes from infected individuals: predominance of unmethylated CpG's

S Weber, B Weiser, KS Kemal, H Burger, CM Ramirez… - Virology, 2014 - Elsevier
Efforts to cure HIV-1 infections aim at eliminating proviral DNA. Integrated DNA from various
viruses often becomes methylated de novo and transcriptionally inactivated. We therefore …

In vivo, in vitro, and in silico analysis of methylation of the HIV-1 provirus

L Chávez, S Kauder, E Verdin - Methods, 2011 - Elsevier
HIV-1 latency is a barrier to overcome in the effort to fully eradicate the virus from infected
individuals using highly active anti-retroviral therapy (HAART). Therefore, the study of the …

Cpg methylation profiles of HIV-1 proviral dna in individuals on art

VF Boltz, C Ceriani, JW Rausch, W Shao, MJ Bale… - Viruses, 2021 - mdpi.com
The latent HIV-1 reservoir is comprised of stably integrated and intact proviruses with limited
to no viral transcription. It has been proposed that latent infection may be maintained by …

Epigenome-wide differential DNA methylation between HIV-infected and uninfected individuals

X Zhang, AC Justice, Y Hu, Z Wang, H Zhao, G Wang… - Epigenetics, 2016 - Taylor & Francis
Epigenetic control of human immunodeficiency virus-1 (HIV-1) genes is critical for viral
integration and latency. However, epigenetic changes in the HIV-1-infected host genome …

Latency-associated DNA methylation patterns among HIV-1 infected individuals with distinct disease progression courses or antiretroviral virologic response

N Mantovani, A Defelicibus, IT da Silva, MF Cicero… - Scientific reports, 2021 - nature.com
DNA methylation is one of the epigenetic modifications that configures gene transcription
programs. This study describes the DNA methylation profile of HIV-infected individuals with …

The Genome-wide Methylation Profile of CD4+ T Cells From Individuals With Human Immunodeficiency Virus (HIV) Identifies Distinct Patterns Associated With …

S Moron-Lopez, V Urrea, J Dalmau… - Clinical Infectious …, 2021 - academic.oup.com
Background Human genetic variation—mostly in the human leukocyte antigen (HLA) and C–
C chemokine receptor type 5 (CCR5) regions—explains 25% of the variability in progression …