Dynamics of chromatin and transcription during transient depletion of the RSC chromatin remodeling complex

A Klein-Brill, D Joseph-Strauss, A Appleboim… - Cell reports, 2019 - cell.com
Nucleosome organization has a key role in transcriptional regulation, yet the precise
mechanisms establishing nucleosome locations and their effect on transcription are unclear …

Interplay among ATP-dependent chromatin remodelers determines chromatin organisation in yeast

HK Prajapati, J Ocampo, DJ Clark - Biology, 2020 - mdpi.com
Cellular DNA is packaged into chromatin, which is composed of regularly-spaced
nucleosomes with occasional gaps corresponding to active regulatory elements, such as …

Nucleosome dynamics during chromatin remodeling in vivo

S Ramachandran, S Henikoff - Nucleus, 2016 - Taylor & Francis
Precise positioning of nucleosomes around regulatory sites is achieved by the action of
chromatin remodelers, which use the energy of ATP to slide, evict or change the composition …

Opposing chromatin remodelers control transcription initiation frequency and start site selection

S Kubik, MJ Bruzzone, D Challal, R Dreos… - Nature structural & …, 2019 - nature.com
Precise nucleosome organization at eukaryotic promoters is thought to be generated by
multiple chromatin remodeler (CR) enzymes and to affect transcription initiation. Using an …

Genomic nucleosome organization reconstituted with pure proteins

N Krietenstein, M Wal, S Watanabe, B Park… - Cell, 2016 - cell.com
Chromatin remodelers regulate genes by organizing nucleosomes around promoters, but
their individual contributions are obfuscated by the complex in vivo milieu of factor …

The dynamics of chromatin remodeling at promoters

J Mellor - Molecular cell, 2005 - cell.com
The nucleosome, the structural unit of chromatin, is known to play a central role in regulating
gene transcription from promoters. The last seven years have spawned a vast amount of …

The RSC chromatin remodelling enzyme has a unique role in directing the accurate positioning of nucleosomes

CJ Wippo, L Israel, S Watanabe, A Hochheimer… - The EMBO …, 2011 - embopress.org
Nucleosomes impede access to DNA. Therefore, nucleosome positioning is fundamental to
genome regulation. Nevertheless, the molecular nucleosome positioning mechanisms are …

Sequence-directed action of RSC remodeler and general regulatory factors modulates+ 1 nucleosome position to facilitate transcription

S Kubik, E O'Duibhir, WJ de Jonge, S Mattarocci… - Molecular cell, 2018 - cell.com
Accessible chromatin is important for RNA polymerase II recruitment and transcription
initiation at eukaryotic promoters. We investigated the mechanistic links between promoter …

Dynamic regulation of transcription factors by nucleosome remodeling

M Li, A Hada, P Sen, L Olufemi, MA Hall, BY Smith… - Elife, 2015 - elifesciences.org
The chromatin landscape and promoter architecture are dominated by the interplay of
nucleosome and transcription factor (TF) binding to crucial DNA sequence elements …

Chromatin remodelers clear nucleosomes from intrinsically unfavorable sites to establish nucleosome-depleted regions at promoters

D Tolkunov, KA Zawadzki, C Singer… - Molecular biology of …, 2011 - Am Soc Cell Biol
Most promoters in yeast contain a nucleosome-depleted region (NDR), but the mechanisms
by which NDRs are established and maintained in vivo are currently unclear. We have …