Global Regulation of Food Supply by Pseudomonas putida DOT-T1E

C Daniels, P Godoy, E Duque… - Journal of …, 2010 - Am Soc Microbiol
ABSTRACT Pseudomonas putida DOT-T1E was used as a model to develop a “phenomics”
platform to investigate the ability of P. putida to grow using different carbon, nitrogen, and …

The functional structure of central carbon metabolism in Pseudomonas putida KT2440

S Sudarsan, S Dethlefsen, LM Blank… - Applied and …, 2014 - Am Soc Microbiol
What defines central carbon metabolism? The classic textbook scheme of central
metabolism includes the Embden-Meyerhof-Parnas (EMP) pathway of glycolysis, the …

Metabolic flux analysis of a phenol producing mutant of Pseudomonas putida S12: verification and complementation of hypotheses derived from transcriptomics

N Wierckx, HJ Ruijssenaars, JH de Winde… - Journal of …, 2009 - Elsevier
The physiological effects of genetic and transcriptional changes observed in a phenol
producing mutant of the solvent-tolerant Pseudomonas putida S12 were assessed with …

Identification of conditionally essential genes for growth of Pseudomonas putida KT2440 on minimal medium through the screening of a genome‐wide mutant library

MA Molina‐Henares, J De La Torre… - Environmental …, 2010 - Wiley Online Library
In silico models for Pseudomonas putida KT2440 metabolism predict 68 genes to be
essential for growth on minimal medium. In this study a genome‐wide collection of single …

Analysis of Pseudomonas putida growth on non‐trivial carbon sources using transcriptomics and genome‐scale modelling

I D'Arrigo, JGR Cardoso, M Rennig… - Environmental …, 2019 - Wiley Online Library
Pseudomonas putida is characterized by a versatile metabolism and stress tolerance traits
that allow the bacterium to cope with different environmental conditions. In this work, the …

[HTML][HTML] Insights into the susceptibility of Pseudomonas putida to industrially relevant aromatic hydrocarbons that it can synthesize from sugars

A García-Franco, P Godoy, E Duque, JL Ramos - Microbial Cell Factories, 2023 - Springer
Abstract Pseudomonas putida DOT-T1E is a highly solvent tolerant strain for which many
genetic tools have been developed. The strain represents a promising candidate host for the …

A cyclic metabolic network in Pseudomonas protegens Pf-5 prioritizes the Entner-Doudoroff pathway and exhibits substrate hierarchy during carbohydrate co …

RA Wilkes, CM Mendonca… - Applied and environmental …, 2019 - Am Soc Microbiol
The genetic characterization of Pseudomonas protegens Pf-5 was recently completed.
However, the inferred metabolic network structure has not yet been evaluated …

The Entner–Doudoroff pathway empowers Pseudomonas putida KT2440 with a high tolerance to oxidative stress

M Chavarría, PI Nikel, D Pérez‐Pantoja… - Environmental …, 2013 - Wiley Online Library
Glucose catabolism of P seudomonas putida is carried out exclusively through the E ntner–
D oudoroff (ED) pathway due to the absence of 6‐phosphofructokinase. In order to activate …

Near‐zero growth kinetics of Pseudomonas putida deduced from proteomic analysis

NS Panikov, M Mandalakis, S Dai… - Environmental …, 2015 - Wiley Online Library
Intensive microbial growth typically observed in laboratory rarely occurs in nature. Because
of severe nutrient deficiency, natural populations exhibit near‐zero growth (NZG). There is a …

Pseudomonas putida KT2440 is naturally endowed to withstand industrial‐scale stress conditions

A Ankenbauer, RA Schäfer, SC Viegas… - Microbial …, 2020 - Wiley Online Library
Pseudomonas putida is recognized as a very promising strain for industrial application due
to its high redox capacity and frequently observed tolerance towards organic solvents. In this …