Bridging Molecular Diversity and Functional Diversity: Complex Traits Dissection in Maize.

J Yu, G Pressoir, JB Holland, S Kresovich… - Crop Sci. Soc. Am …, 2005 - crops.confex.com
The key to complex trait dissection is to bridge molecular diversity with functional diversity
found in the germplasm under study. Linkage analysis and association studies are two …

Bridging genomics and genetic diversity: linkage disequilibrium structure and association mapping in maize and other cereals

JB Veyrieras, L Camus‐Kulandaivelu… - Crop …, 2007 - Wiley Online Library
Linkage disequilibrium (LD) and association mapping is receiving considerable attention in
the plant genetics community for its potential to use existing genetic resources collections to …

Maize association population: a high‐resolution platform for quantitative trait locus dissection

SA Flint‐Garcia, AC Thuillet, J Yu, G Pressoir… - The plant …, 2005 - Wiley Online Library
Crop improvement and the dissection of complex genetic traits require germplasm diversity.
Although this necessary phenotypic variability exists in diverse maize, most research is …

Genetic analysis and characterization of a new maize association mapping panel for quantitative trait loci dissection

X Yang, J Yan, T Shah, ML Warburton, Q Li, L Li… - Theoretical and Applied …, 2010 - Springer
Association mapping based on the linkage disequilibrium provides a promising tool to
identify genes responsible for quantitative variations underlying complex traits. Presented …

Structural variants contribute to phenotypic variation in maize

NS Catlin, HI Agha, AE Platts, M Munasinghe… - bioRxiv, 2024 - biorxiv.org
Comprehensively identifying the loci shaping trait variation has been challenging, in part
because standard approaches often miss many types of genetic variants. Structural variants …

High-density genotyping: an overkill for QTL mapping? Lessons learned from a case study in maize and simulations

M Stange, HF Utz, TA Schrag, AE Melchinger… - Theoretical and applied …, 2013 - Springer
High-density genotyping is extensively exploited in genome-wide association mapping
studies and genomic selection in maize. By contrast, linkage mapping studies were until …

[HTML][HTML] Genome–phenome wide association in maize and arabidopsis identifies a common molecular and evolutionary signature

Z Liang, Y Qiu, JC Schnable - Molecular plant, 2020 - cell.com
Linking natural genetic variation to trait variation can help determine the functional roles
ofdifferent genes. Variations of one or several traits are often assessed separately. High …

Applications of linkage disequilibrium and association mapping in maize

ES Ersoz, J Yu, ES Buckler - Molecular genetic approaches to maize …, 2009 - Springer
Association mapping, also known as linkage disequilibrium mapping, is a relatively new and
promising genetic method for complex trait dissection. Association map ping has the …

Genome-wide complex trait dissection through nested association mapping

ES Buckler, J Yu, JB Holland, MD McMullen - Genetics, 2008 - ars.usda.gov
Most genetic mapping has either involved examining the offspring of two individuals (linkage
mapping) or examining a large collection of unrelated individuals (association mapping). We …

Functionally, structurally, and evolutionarily distinct set of genes linked to phenome wide variation in maize

Z Liang, Y Qiu, JC Schnable - bioRxiv, 2019 - biorxiv.org
In many eukaryotic species the organismal functions of only a small fraction of annotated
genes are supported by individual genetic characterization. The organismal functions of a …