[HTML][HTML] Weighting strategies for single-step genomic BLUP: an iterative approach for accurate calculation of GEBV and GWAS
Genomic Best Linear Unbiased Predictor (GBLUP) assumes equal variance for all single
nucleotide polymorphisms (SNP). When traits are influenced by major SNP, Bayesian …
nucleotide polymorphisms (SNP). When traits are influenced by major SNP, Bayesian …
[HTML][HTML] Including dominance effects in the genomic BLUP method for genomic evaluation
M Nishio, M Satoh - PloS one, 2014 - journals.plos.org
We evaluated the performance of GBLUP including dominance genetic effect (GBLUP-D) by
estimating variances and predicting genetic merits in a computer simulation and 2 actual …
estimating variances and predicting genetic merits in a computer simulation and 2 actual …
[HTML][HTML] Single-step genomic evaluations from theory to practice: using SNP chips and sequence data in BLUPF90
Single-step genomic evaluation became a standard procedure in livestock breeding, and
the main reason is the ability to combine all pedigree, phenotypes, and genotypes available …
the main reason is the ability to combine all pedigree, phenotypes, and genotypes available …
[HTML][HTML] Comparison of genomic predictions for lowly heritable traits using multi-step and single-step genomic best linear unbiased predictor in Holstein cattle
The success and sustainability of a breeding program incorporating genomic information is
largely dependent on the accuracy of predictions. For low heritability traits, large training …
largely dependent on the accuracy of predictions. For low heritability traits, large training …
[HTML][HTML] Invited review: efficient computation strategies in genomic selection
The purpose of this study is review and evaluation of computing methods used in genomic
selection for animal breeding. Commonly used models include SNP BLUP with extensions …
selection for animal breeding. Commonly used models include SNP BLUP with extensions …
Genomic BLUP decoded: a look into the black box of genomic prediction
Genomic best linear unbiased prediction (BLUP) is a statistical method that uses
relationships between individuals calculated from single-nucleotide polymorphisms (SNPs) …
relationships between individuals calculated from single-nucleotide polymorphisms (SNPs) …
[HTML][HTML] Incorporation of causative quantitative trait nucleotides in single-step GBLUP
Background Much effort is put into identifying causative quantitative trait nucleotides (QTN)
in animal breeding, empowered by the availability of dense single nucleotide polymorphism …
in animal breeding, empowered by the availability of dense single nucleotide polymorphism …
Comparison of genomic and traditional BLUP‐estimated breeding value accuracy and selection response under alternative trait and genomic parameters
WM Muir - Journal of Animal Breeding and Genetics, 2007 - Wiley Online Library
Accuracy of prediction of estimated breeding values based on genome‐wide markers
(GEBV) and selection based on GEBV as compared with traditional Best Linear Unbiased …
(GEBV) and selection based on GEBV as compared with traditional Best Linear Unbiased …
[HTML][HTML] Weighted single-step genomic BLUP improves accuracy of genomic breeding values for protein content in French dairy goats: A quantitative trait influenced …
M Teissier, H Larroque, C Robert-Granié - Genetics Selection Evolution, 2018 - Springer
Background In 2017, genomic selection was implemented in French dairy goats using the
single-step genomic best linear unbiased prediction (ssGBLUP) method, which assumes …
single-step genomic best linear unbiased prediction (ssGBLUP) method, which assumes …
Genomic prediction using multi-trait weighted GBLUP accounting for heterogeneous variances and covariances across the genome
Implicit assumption of common (co) variance for all loci in multi-trait Genomic Best Linear
Unbiased Prediction (GBLUP) results in a genomic relationship matrix (G) that is common to …
Unbiased Prediction (GBLUP) results in a genomic relationship matrix (G) that is common to …
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