Tracking the Origins of Pseudomonas aeruginosa Phylogroups by Diversity and Evolutionary Analysis of Important Pathogenic Marker Genes

SE Quiroz-Morales, S García-Reyes, GY Ponce-Soto… - Diversity, 2022 - mdpi.com
Pseudomonas aeruginosa is a widespread environmental bacterium and an opportunistic
pathogen that represents a health hazard due to its production of virulence factors and its …

BACTOME—a reference database to explore the sequence- and gene expression-variation landscape of Pseudomonas aeruginosa clinical isolates

K Hornischer, A Khaledi, S Pohl… - Nucleic acids …, 2019 - academic.oup.com
Extensive use of next-generation sequencing (NGS) for pathogen profiling has the potential
to transform our understanding of how genomic plasticity contributes to phenotypic …

A large-scale whole-genome comparison shows that experimental evolution in response to antibiotics predicts changes in naturally evolved clinical Pseudomonas …

SJT Wardell, A Rehman, LW Martin… - Antimicrobial agents …, 2019 - Am Soc Microbiol
Pseudomonas aeruginosa is an opportunistic pathogen that causes a wide range of acute
and chronic infections. An increasing number of isolates have mutations that make them …

Single-Nucleotide Polymorphism-Based Genetic Diversity Analysis of Clinical Pseudomonas aeruginosa Isolates

U Muthukumarasamy, M Preusse… - Genome Biology and …, 2020 - academic.oup.com
Extensive use of next-generation sequencing has the potential to transform our knowledge
on how genomic variation within bacterial species impacts phenotypic versatility. Because …

Antibiotic resistance in Pseudomonas aeruginosa and adaptation to complex dynamic environments

LM Sommer, HK Johansen, S Molin - Microbial genomics, 2020 - microbiologyresearch.org
Antibiotic resistance has become a serious threat to human health (WHO Antibacterial
Agents in Clinical Development: an Analysis of the Antibacterial Clinical Development …

The Pseudomonas aeruginosa transcriptional landscape is shaped by environmental heterogeneity and genetic variation

A Dötsch, M Schniederjans, A Khaledi, K Hornischer… - MBio, 2015 - Am Soc Microbiol
Phenotypic variability among bacteria depends on gene expression in response to different
environments, and it also reflects differences in genomic structure. In this study, we analyzed …

There is no hiding if you Seq: recent breakthroughs in Pseudomonas aeruginosa research revealed by genomic and transcriptomic next-generation sequencing

RXE Valli, M Lyng… - Journal of medical …, 2020 - microbiologyresearch.org
The advent of next-generation sequencing technology has revolutionized the field of
prokaryotic genetics and genomics by allowing interrogation of entire genomes …

Whole-Genome Sequence Variation among Multiple Isolates of Pseudomonas aeruginosa

DH Spencer, A Kas, EE Smith, CK Raymond… - Journal of …, 2003 - Am Soc Microbiol
Whole-genome shotgun sequencing was used to study the sequence variation of three
Pseudomonas aeruginosa isolates, two from clonal infections of cystic fibrosis patients and …

Pseudomonas aeruginosa essentials: an update on investigation of essential genes

M Juhas - Microbiology, 2015 - microbiologyresearch.org
Pseudomonas aeruginosa is the leading cause of nosocomial infections, particularly in
immunocompromised, cancer, burn and cystic fibrosis patients. Development of novel …

The Accessory Genome of Pseudomonas aeruginosa

VL Kung, EA Ozer, AR Hauser - Microbiology and molecular …, 2010 - Am Soc Microbiol
Pseudomonas aeruginosa strains exhibit significant variability in pathogenicity and
ecological flexibility. Such interstrain differences reflect the dynamic nature of the P …