Analysis of transcripts and splice isoforms in Medicago sativa L. by single-molecule long-read sequencing

Y Chao, J Yuan, T Guo, L Xu, Z Mu, L Han - Plant molecular biology, 2019 - Springer
Key message The full-length transcriptome of alfalfa was analyzed with PacBio single-
molecule long-read sequencing technology. The transcriptome data provided full-length …

[HTML][HTML] The Medicago sativa gene index 1.2: a web-accessible gene expression atlas for investigating expression differences between Medicago sativa subspecies

JA O'Rourke, F Fu, B Bucciarelli, SS Yang, DA Samac… - BMC genomics, 2015 - Springer
Abstract Background Alfalfa (Medicago sativa L.) is the primary forage legume crop species
in the United States and plays essential economic and ecological roles in agricultural …

[PDF][PDF] The chromosome-level genome sequence of the autotetraploid alfalfa and resequencing of core germplasms provide genomic resources for alfalfa research

C Shen, H Du, Z Chen, H Lu, F Zhu, H Chen, X Meng… - Molecular Plant, 2020 - cell.com
Alfalfa (Medicago sativa) is one of the most important forage crops in the world; however, its
molecular genetics and breeding research are hindered due to the lack of a high-quality …

Genome assembly of alfalfa cultivar zhongmu-4 and identification of SNPs associated with agronomic traits

R Long, F Zhang, Z Zhang, M Li, L Chen… - Genomics …, 2022 - academic.oup.com
Alfalfa (Medicago sativa L.) is the most important legume forage crop worldwide with high
nutritional value and yield. For a long time, the breeding of alfalfa was hampered by lacking …

[HTML][HTML] Analysis of transcripts and splice isoforms in red clover (Trifolium pratense L.) by single-molecule long-read sequencing

Y Chao, J Yuan, S Li, S Jia, L Han, L Xu - BMC plant biology, 2018 - Springer
Abstract Background Red clover (Trifolium pratense L.) is an important cool-season legume
plant, which is the most widely planted forage legume after alfalfa. Although a draft genome …

[HTML][HTML] Global transcriptome sequencing using the Illumina platform and the development of EST-SSR markers in autotetraploid alfalfa

Z Liu, T Chen, L Ma, Z Zhao, PX Zhao, Z Nan, Y Wang - PloS one, 2013 - journals.plos.org
Background Alfalfa is the most widely cultivated forage legume and one of the most
economically valuable crops in the world. The large size and complexity of the alfalfa …

MODMS: a multi-omics database for facilitating biological studies on alfalfa (Medicago sativa L.)

L Fang, T Liu, M Li, XM Dong, Y Han, C Xu… - Horticulture …, 2024 - academic.oup.com
Alfalfa (Medicago sativa L.) is a globally important forage crop. It also serves as a vegetable
and medicinal herb because of its excellent nutritional quality and significant economic …

Genome-wide identification and comparative analysis of alternative splicing across four legume species

Z Wang, H Zhang, W Gong - Planta, 2019 - Springer
Main conclusion Alternative splicing EVENTS were genome-wide identified for four legume
species, and nitrogen fixation-related gene families and evolutionary analysis was also …

[HTML][HTML] Development and characterization of simple sequence repeat (SSR) markers based on RNA-sequencing of Medicago sativa and in silico mapping onto the M …

Z Wang, G Yu, B Shi, X Wang, H Qiang, H Gao - PLoS One, 2014 - journals.plos.org
Sufficient codominant genetic markers are needed for various genetic investigations in
alfalfa since the species is an outcrossing autotetraploid. With the newly developed next …

Single‐Feature Polymorphism Discovery in the Transcriptome of Tetraploid Alfalfa

SS Yang, WW Xu, M Tesfaye, JAFS Lamb… - The Plant …, 2009 - Wiley Online Library
Advances in alfalfa [Medicago sativa (L.) subsp. sativa] breeding, molecular genetics, and
genomics have been slow because this crop is an allogamous autotetraploid (2n= 4x= 32) …