Robust markers reflecting phylogeny and taxonomy of rhizobia
YM Zhang, CF Tian, XH Sui, WF Chen, WX Chen - 2012 - journals.plos.org
Genomic ANI (Average Nucleotide Identity) has been found to be able to replace DNA-DNA
hybridization in prokaryote taxonomy. The ANI of each of the core genes that has a …
hybridization in prokaryote taxonomy. The ANI of each of the core genes that has a …
Taxonomy of rhizobia and agrobacteria from the Rhizobiaceae family in light of genomics
E Ormeno-Orrillo, LE Servín-Garcidueñas… - Systematic and applied …, 2015 - Elsevier
Phylogenomic analyses showed two major superclades within the family Rhizobiaceae that
corresponded to the Rhizobium/Agrobacterium and Shinella/Ensifer groups. Within the …
corresponded to the Rhizobium/Agrobacterium and Shinella/Ensifer groups. Within the …
A Genomotaxonomy View of the Bradyrhizobium Genus
E Ormeño-Orrillo, E Martínez-Romero - Frontiers in microbiology, 2019 - frontiersin.org
Whole genome analysis of the Bradyrhizobium genus using average nucleotide identity
(ANI) and phylogenomics showed the genus to be essentially monophyletic with seven …
(ANI) and phylogenomics showed the genus to be essentially monophyletic with seven …
Genomic Metrics Applied to Rhizobiales (Hyphomicrobiales): Species Reclassification, Identification of Unauthentic Genomes and False Type Strains
CG Volpiano, FH Sant'Anna, A Ambrosini… - Frontiers in …, 2021 - frontiersin.org
Taxonomic decisions within the order Rhizobiales have relied heavily on the interpretations
of highly conserved 16S rRNA sequences and DNA–DNA hybridizations (DDH). Currently …
of highly conserved 16S rRNA sequences and DNA–DNA hybridizations (DDH). Currently …
The changing paradigm of rhizobial taxonomy and its systematic growth upto postgenomic technologies
Rhizobia are a diazotrophic group of bacteria that are usually isolated form the nodules in
roots, stem of leguminous plants and are able to form nodules in the host plant owing to the …
roots, stem of leguminous plants and are able to form nodules in the host plant owing to the …
Genome-informed Bradyrhizobium taxonomy: where to from here?
Bradyrhizobium is thought to be the largest and most diverse rhizobial genus, but this is not
reflected in the number of described species. Although it was one of the first rhizobial genera …
reflected in the number of described species. Although it was one of the first rhizobial genera …
New insights into the taxonomy of bacteria in the genomic era and a case study with rhizobia
LC Ferraz Helene, MS Klepa… - International Journal of …, 2022 - Wiley Online Library
Since early studies, the history of prokaryotes taxonomy has dealt with many changes driven
by the development of new and more robust technologies. As a result, the number of new …
by the development of new and more robust technologies. As a result, the number of new …
Taxonomy of Rhizobiaceae revisited: proposal of a new framework for genus delimitation
N Kuzmanović, C Fagorzi… - … of systematic and …, 2022 - microbiologyresearch.org
The alphaproteobacterial family Rhizobiaceae is highly diverse, with 168 species with
validly published names classified into 17 genera with validly published names. Most …
validly published names classified into 17 genera with validly published names. Most …
Phylogenomic Rhizobium Species Are Structured by a Continuum of Diversity and Genomic Clusters
The bacterial genus Rhizobium comprises diverse symbiotic nitrogen-fixing species
associated with the roots of plants in the Leguminosae family. Multiple genomic clusters …
associated with the roots of plants in the Leguminosae family. Multiple genomic clusters …
A database for the taxonomic and phylogenetic identification of the genus Bradyrhizobium using multilocus sequence analysis
Background Biological nitrogen fixation, with an emphasis on the legume-rhizobia
symbiosis, is a key process for agriculture and the environment, allowing the replacement of …
symbiosis, is a key process for agriculture and the environment, allowing the replacement of …