SAG-RAD: a method for single-cell population genomics of unicellular eukaryotes
R Gollnisch, J Wallenius, KE Gribble… - Molecular biology …, 2023 - academic.oup.com
Sequencing of reduced representation libraries enables genotyping of many individuals for
population genomic studies. However, high amounts of DNA are required, and the method …
population genomic studies. However, high amounts of DNA are required, and the method …
Next generation sequencing in nonmodel organisms: has the future arrived?
ML Johansson - 2009 - academic.oup.com
The conference Next Generation Genome Analysis in Non-Model Organisms was an
American Genetic Association special event hosted by the University of Connecticut at Storrs …
American Genetic Association special event hosted by the University of Connecticut at Storrs …
Genomicus: five genome browsers for comparative genomics in eukaryota
Abstract Genomicus (http://www. dyogen. ens. fr/genomicus/) is a database and an online
tool that allows easy comparative genomic visualization in> 150 eukaryote genomes. It …
tool that allows easy comparative genomic visualization in> 150 eukaryote genomes. It …
Genomes in a bottle: creating standard reference materials for genomic variation-why, what and how?
Deep exome resequencing is a powerful approach for delineating patterns of protein-coding
variation among genes, pathways, individuals and populations. We analyzed exome data …
variation among genes, pathways, individuals and populations. We analyzed exome data …
Ensembl Genomes 2016: more genomes, more complexity
PJ Kersey, JE Allen, I Armean, S Boddu… - Nucleic acids …, 2016 - academic.oup.com
Abstract Ensembl Genomes (http://www. ensemblgenomes. org) is an integrating resource
for genome-scale data from non-vertebrate species, complementing the resources for …
for genome-scale data from non-vertebrate species, complementing the resources for …
Direct determination of diploid genome sequences
Determining the genome sequence of an organism is challenging, yet fundamental to
understanding its biology. Over the past decade, thousands of human genomes have been …
understanding its biology. Over the past decade, thousands of human genomes have been …
Sequencing, assembling, and correcting draft genomes using recombinant populations
Current de novo whole-genome sequencing approaches often are inadequate for
organisms lacking substantial preexisting genetic data. Problems with these methods are …
organisms lacking substantial preexisting genetic data. Problems with these methods are …
[HTML][HTML] A universal DNA mini-barcode for biodiversity analysis
I Meusnier, GAC Singer, JF Landry, DA Hickey… - BMC genomics, 2008 - Springer
Background The goal of DNA barcoding is to develop a species-specific sequence library for
all eukaryotes. A 650 bp fragment of the cytochrome c oxidase 1 (CO1) gene has been used …
all eukaryotes. A 650 bp fragment of the cytochrome c oxidase 1 (CO1) gene has been used …
Ecological perspectives on the sequenced genome collection
JB Hughes Martiny, D Field - Ecology Letters, 2005 - Wiley Online Library
Our complete genome collection is one of our most valuable biological resources. A key
challenge for the future is the interpretation of these genomes from an ecological …
challenge for the future is the interpretation of these genomes from an ecological …
[HTML][HTML] Using comparative genomics to reorder the human genome sequence into a virtual sheep genome
BP Dalrymple, EF Kirkness, M Nefedov, S McWilliam… - Genome biology, 2007 - Springer
Background Is it possible to construct an accurate and detailed subgene-level map of a
genome using bacterial artificial chromosome (BAC) end sequences, a sparse marker map …
genome using bacterial artificial chromosome (BAC) end sequences, a sparse marker map …