FitSNAP: Atomistic machine learning with LAMMPS

A Rohskopf, C Sievers, N Lubbers… - Journal of Open …, 2023 - joss.theoj.org
Chemical and physical properties of complex materials emerge from the collective motions
of the constituent atoms. These motions are in turn determined by a variety of interatomic …

Addressing uncertainty in atomistic machine learning

AA Peterson, R Christensen, A Khorshidi - … Chemistry Chemical Physics, 2017 - pubs.rsc.org
Machine-learning regression has been demonstrated to precisely emulate the potential
energy and forces that are output from more expensive electronic-structure calculations …

LAMMPS-a flexible simulation tool for particle-based materials modeling at the atomic, meso, and continuum scales

AP Thompson, HM Aktulga, R Berger… - Computer Physics …, 2022 - Elsevier
Since the classical molecular dynamics simulator LAMMPS was released as an open source
code in 2004, it has become a widely-used tool for particle-based modeling of materials at …

A universal strategy for the creation of machine learning-based atomistic force fields

TD Huan, R Batra, J Chapman, S Krishnan… - NPJ Computational …, 2017 - nature.com
Emerging machine learning (ML)-based approaches provide powerful and novel tools to
study a variety of physical and chemical problems. In this contribution, we outline a universal …

AENET–LAMMPS and AENET–TINKER: Interfaces for accurate and efficient molecular dynamics simulations with machine learning potentials

MS Chen, T Morawietz, H Mori, TE Markland… - The Journal of …, 2021 - pubs.aip.org
Machine-learning potentials (MLPs) trained on data from quantum-mechanics based first-
principles methods can approach the accuracy of the reference method at a fraction of the …

PyXtal_FF: a python library for automated force field generation

H Yanxon, D Zagaceta, B Tang… - Machine Learning …, 2020 - iopscience.iop.org
We present PyXtal_FF—a package based on Python programming language—for
developing machine learning potentials (MLPs). The aim of PyXtal_FF is to promote the …

Machine learning force fields: Recent advances and remaining challenges

I Poltavsky, A Tkatchenko - The journal of physical chemistry …, 2021 - ACS Publications
In chemistry and physics, machine learning (ML) methods promise transformative impacts by
advancing modeling and improving our understanding of complex molecules and materials …

Learning matter: Materials design with machine learning and atomistic simulations

S Axelrod, D Schwalbe-Koda… - Accounts of Materials …, 2022 - ACS Publications
Conspectus Designing new materials is vital for addressing pressing societal challenges in
health, energy, and sustainability. The combination of physicochemical laws and empirical …

Atom-centered machine-learning force field package

L Li, RA Ciufo, J Lee, C Zhou, B Lin, J Cho… - Computer Physics …, 2023 - Elsevier
In recent years, machine learning algorithms have been widely used for constructing force
fields with an accuracy of ab initio methods and the efficiency of classical force fields. Here …

Amp: A modular approach to machine learning in atomistic simulations

A Khorshidi, AA Peterson - Computer Physics Communications, 2016 - Elsevier
Electronic structure calculations, such as those employing Kohn–Sham density functional
theory or ab initio wavefunction theories, have allowed for atomistic-level understandings of …