Histones predate the split between bacteria and archaea

V Alva, AN Lupas - Bioinformatics, 2019 - academic.oup.com
Motivation Histones form octameric complexes called nucleosomes, which organize the
genomic DNA of eukaryotes into chromatin. Each nucleosome comprises two copies each of …

Growth temperature is the principal driver of chromatinization in archaea

A Hocher, G Borrel, K Fadhlaoui, JF Brugère… - BioRxiv, 2021 - biorxiv.org
Across the tree of life, DNA in living cells is associated with proteins that coat chromosomes,
constrain their structure and influence DNA-templated processes such as transcription and …

[HTML][HTML] Archaeal histones: dynamic and versatile genome architects

B Henneman, RT Dame - AIMS Microbiology, 2015 - aimspress.com
Genome organization and compaction in Archaea involves different chromatin proteins,
among which homologues of eukaryotic histones. Archaeal histones are considered the …

Chromatinization of Escherichia coli with archaeal histones

M Rojec, A Hocher, KM Stevens, M Merkenschlager… - Elife, 2019 - elifesciences.org
Nucleosomes restrict DNA accessibility throughout eukaryotic genomes, with repercussions
for replication, transcription, and other DNA-templated processes. How this globally …

A phylogenetic and proteomic reconstruction of eukaryotic chromatin evolution

X Grau-Bové, C Navarrete, C Chiva… - Nature ecology & …, 2022 - nature.com
Histones and associated chromatin proteins have essential functions in eukaryotic genome
organization and regulation. Despite this fundamental role in eukaryotic cell biology, we lack …

Histone-organized chromatin in bacteria

A Hocher, SP Laursen, P Radford, J Tyson, C Lambert… - bioRxiv, 2023 - biorxiv.org
Histones are the principal constituents of chromatin in eukaryotes and most archaea, while
bacteria generally rely on an orthogonal set of proteins to organize their chromosomes …

Archaeal histones and the origin of the histone fold

K Sandman, JN Reeve - Current opinion in microbiology, 2006 - Elsevier
Histone sequences have been identified in many archaeal genomes and in environmental
samples, and they constitute a family of proteins that are structural homologs of the …

Chromatin is an ancient innovation conserved between Archaea and Eukarya

R Ammar, D Torti, K Tsui, M Gebbia, T Durbic… - Elife, 2012 - elifesciences.org
The eukaryotic nucleosome is the fundamental unit of chromatin, comprising a protein
octamer that wraps∼ 147 bp of DNA and has essential roles in DNA compaction, replication …

Specific DNA binding of archaeal histones HMfA and HMfB

AM Erkelens, B Henneman, RA Van Der Valk… - Frontiers in …, 2023 - frontiersin.org
In archaea, histones play a role in genome compaction and are involved in transcription
regulation. Whereas archaeal histones bind DNA without sequence specificity, they bind …

Comparative analysis of genome-wide protein-DNA interactions across domains of life reveals unique binding patterns for hypersaline archaeal histones

S Sakrikar, RK Hackley, M Martinez-Pastor, CL Darnell… - bioRxiv, 2022 - biorxiv.org
ABSTRACT DNA-binding proteins with roles in chromatin architecture and transcriptional
regulation are present in all three domains of life. Histones package DNA and regulate gene …