[HTML][HTML] Pathway analysis of seven common diseases assessed by genome-wide association

A Torkamani, EJ Topol, NJ Schork - Genomics, 2008 - Elsevier
Recent genome-wide association studies (GWAS) have identified DNA sequence variations
that exhibit unequivocal statistical associations with many common chronic diseases …

The Next PAGE in understanding complex traits: design for the analysis of Population Architecture Using Genetics and Epidemiology (PAGE) Study

TC Matise, JL Ambite, S Buyske… - American journal of …, 2011 - academic.oup.com
Genetic studies have identified thousands of variants associated with complex traits.
However, most association studies are limited to populations of European descent and a …

Analysing biological pathways in genome-wide association studies

K Wang, M Li, H Hakonarson - Nature Reviews Genetics, 2010 - nature.com
Genome-wide association (GWA) studies have typically focused on the analysis of single
markers, which often lacks the power to uncover the relatively small effect sizes conferred by …

Replication of past candidate loci for common diseases and phenotypes in 100 genome-wide association studies

K Siontis, NA Patsopoulos, J Ioannidis - European Journal of Human …, 2010 - nature.com
Genome-wide association studies (GWASs) have created a paradigm shift in discovering
genetic associations for common diseases and phenotypes, but it is unclear whether the …

Large-scale genome-wide enrichment analyses identify new trait-associated genes and pathways across 31 human phenotypes

X Zhu, M Stephens - Nature communications, 2018 - nature.com
Genome-wide association studies (GWAS) aim to identify genetic factors associated with
phenotypes. Standard analyses test variants for associations individually. However, variant …

Candidate-gene approaches for studying complex genetic traits: practical considerations

HK Tabor, NJ Risch, RM Myers - Nature Reviews Genetics, 2002 - nature.com
Association studies with candidate genes have been widely used for the study of complex
diseases. However, this approach has been criticized because of non-replication of results …

Required sample size and nonreplicability thresholds for heterogeneous genetic associations

R Moonesinghe, MJ Khoury, T Liu… - Proceedings of the …, 2008 - National Acad Sciences
Many gene–disease associations proposed to date have not been consistently replicated
across different populations. Nonreplication often reflects false positives in the original …

Genome-wide association studies: hypothesis-“free” or “engaged”?

GD Kitsios, E Zintzaras - Translational Research, 2009 - Elsevier
The advent of the first wave of genome-wide association studies (GWAS) provided a new
conceptual framework in the search for variants underlying common disorders: a massive …

Predicting gene targets from integrative analyses of summary data from GWAS and eQTL studies for 28 human complex traits

JMW Pavlides, Z Zhu, J Gratten, AF McRae, NR Wray… - Genome medicine, 2016 - Springer
Genome-wide association studies (GWAS) have identified hundreds of genetic variants
associated with complex traits and diseases. However, elucidating the causal genes …

Genetic pleiotropy in complex traits and diseases: implications for genomic medicine

J Gratten, PM Visscher - Genome medicine, 2016 - Springer
Several recent papers have used summary results from genome-wide association studies to
characterize genetic overlap between human complex traits and common diseases. The …