Permeation process of small molecules across lipid membranes studied by molecular dynamics simulations
SJ Marrink, HJC Berendsen - The Journal of Physical Chemistry, 1996 - ACS Publications
The transport of small molecules across a phospholipid membrane is studied by molecular
dynamics simulations. The effects of size, hydrophobicity, and asphericity of the penetrants …
dynamics simulations. The effects of size, hydrophobicity, and asphericity of the penetrants …
Simulation of water transport through a lipid membrane
SJ Marrink, HJC Berendsen - The Journal of Physical Chemistry, 1994 - ACS Publications
To obtain insight in the process of water permeation through a lipid membrane, we
performed molecular dynamics simulations on a phospholipid (DPPC)/water system with …
performed molecular dynamics simulations on a phospholipid (DPPC)/water system with …
Permeation of small molecules through a lipid bilayer: a computer simulation study
D Bemporad, JW Essex, C Luttmann - The Journal of Physical …, 2004 - ACS Publications
To reach their biological target, drugs have to cross cell membranes, and understanding
passive membrane permeation is therefore crucial for rational drug design. Molecular …
passive membrane permeation is therefore crucial for rational drug design. Molecular …
Molecular dynamics simulations of membrane permeability
This Review illustrates the evaluation of permeability of lipid membranes from molecular
dynamics (MD) simulation primarily using water and oxygen as examples. Membrane …
dynamics (MD) simulation primarily using water and oxygen as examples. Membrane …
[HTML][HTML] Molecular simulation of nonfacilitated membrane permeation
E Awoonor-Williams, CN Rowley - Biochimica et Biophysica Acta (BBA) …, 2016 - Elsevier
This is a review. Non-electrolytic compounds typically cross cell membranes by passive
diffusion. The rate of permeation is dependent on the chemical properties of the solute and …
diffusion. The rate of permeation is dependent on the chemical properties of the solute and …
[HTML][HTML] Membrane permeability of small molecules from unbiased molecular dynamics simulations
Permeation of many small molecules through lipid bilayers can be directly observed in
molecular dynamics simulations on the nano-and microsecond timescale. While unbiased …
molecular dynamics simulations on the nano-and microsecond timescale. While unbiased …
[HTML][HTML] Permeability across lipid membranes
W Shinoda - Biochimica et Biophysica Acta (BBA)-Biomembranes, 2016 - Elsevier
Molecular permeation through lipid membranes is a fundamental biological process that is
important for small neutral molecules and drug molecules. Precise characterization of free …
important for small neutral molecules and drug molecules. Precise characterization of free …
Divergent diffusion coefficients in simulations of fluids and lipid membranes
We investigate the dependence of single-particle diffusion coefficients on the size and
shape of the simulation box in molecular dynamics simulations of fluids and lipid …
shape of the simulation box in molecular dynamics simulations of fluids and lipid …
[PDF][PDF] Computer simulation of small molecule permeation across a lipid bilayer: dependence on bilayer properties and solute volume, size, and cross-sectional area
D Bemporad, C Luttmann, JW Essex - Biophysical journal, 2004 - cell.com
Cell membrane permeation is required for most drugs to reach their biological target, and
understanding this process is therefore crucial for rational drug design. Recent molecular …
understanding this process is therefore crucial for rational drug design. Recent molecular …
Permeability of small molecules through a lipid bilayer: a multiscale simulation study
The transmembrane permeation of eight small (molecular weight< 100) organic molecules
across a phospholipid bilayer is investigated by multiscale molecular dynamics simulation …
across a phospholipid bilayer is investigated by multiscale molecular dynamics simulation …
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