Two mechanisms of permeation of small neutral molecules and hydrated ions across phospholipid bilayers

AG Volkov, S Paula, DW Deamer - Bioelectrochemistry and bioenergetics, 1997 - Elsevier
The Gibbs free energy of dipole or iron permeation of lipid bilayers is calculated as the sum
of all electrostatic, solvophobic and specific interactions. Partitioning models are consistent …

Solute diffusion in lipid bilayer membranes: an atomic level study by molecular dynamics simulation

D Bassolino-Klimas, HE Alper, TR Stouch - Biochemistry, 1993 - ACS Publications
Revised Manuscript Received August 31, 1993® abstract: To elucidate the mechanism of
solute diffusion through lipid bilayer membranes, nearly 4 ns of molecular dynamics …

Permeation of protons, potassium ions, and small polar molecules through phospholipid bilayers as a function of membrane thickness

S Paula, AG Volkov, AN Van Hoek, TH Haines… - Biophysical journal, 1996 - cell.com
Two mechanisms have been proposed to account for solute permeation of lipid bilayers.
Partitioning into the hydrophobic phase of the bilayer, followed by diffusion, is accepted by …

Simulation-based approaches for determining membrane permeability of small compounds

CT Lee, J Comer, C Herndon, N Leung… - Journal of chemical …, 2016 - ACS Publications
Predicting the rate of nonfacilitated permeation of solutes across lipid bilayers is important to
drug design, toxicology, and signaling. These rates can be estimated using molecular …

Free volume properties of a simulated lipid membrane

SJ Marrink, RM Sok, HJC Berendsen - The Journal of chemical physics, 1996 - pubs.aip.org
In this paper, an extensive analysis of free volume related properties of a lipid membrane is
given. Using percolation theory, and comparing the free volume properties to those of a soft …

[HTML][HTML] Behaviour of small solutes and large drugs in a lipid bilayer from computer simulations

D Bemporad, C Luttmann, JW Essex - Biochimica et Biophysica Acta (BBA) …, 2005 - Elsevier
To reach their biological target, drugs have to cross cell membranes, and understanding
passive membrane permeation is therefore crucial for rational drug design. Molecular …

Molecular dynamics simulation study of permeation of molecules through skin lipid bilayer

R Gupta, DB Sridhar, B Rai - The Journal of Physical Chemistry B, 2016 - ACS Publications
Stratum Corneum (SC), the outermost layer of skin, is mainly responsible for skin's barrier
function. The complex lipid matrix of SC determines these barrier properties. In this study …

A molecular-dynamics study of lipid bilayers: effects of the hydrocarbon chain length on permeability

T Sugii, S Takagi, Y Matsumoto - The journal of chemical physics, 2005 - pubs.aip.org
In this paper, we investigate the effects of the hydrocarbon chain length of lipid molecules on
the permeation process of small molecules through lipid bilayers. We perform molecular …

Molecular simulation of permeation of small penetrants through membranes. 1. Diffusion coefficients

Y Tamai, H Tanaka, K Nakanishi - Macromolecules, 1994 - ACS Publications
Molecular dynamics simulations have been carried out in order to examine the mechanism
of diffusion of small penetrants in amorphous polymermembranes. Diffusion processes of …

Intrinsic membrane permeability to small molecules

C Hannesschlaeger, A Horner, P Pohl - Chemical reviews, 2019 - ACS Publications
Spontaneous solute and solvent permeation through membranes is of vital importance to
human life, be it gas exchange in red blood cells, metabolite excretion, drug/toxin uptake, or …