Biodiversity and biogeography of phages in modern stromatolites and thrombolites

C Desnues, B Rodriguez-Brito, S Rayhawk, S Kelley… - Nature, 2008 - nature.com
Viruses, and more particularly phages (viruses that infect bacteria), represent one of the
most abundant living entities in aquatic and terrestrial environments. The biogeography of …

Twelve previously unknown phage genera are ubiquitous in global oceans

K Holmfeldt, N Solonenko, M Shah… - Proceedings of the …, 2013 - National Acad Sciences
Viruses are fundamental to ecosystems ranging from oceans to humans, yet our ability to
study them is bottlenecked by the lack of ecologically relevant isolates, resulting in …

Phage diversity, genomics and phylogeny

MB Dion, F Oechslin, S Moineau - Nature Reviews Microbiology, 2020 - nature.com
Recent advances in viral metagenomics have enabled the rapid discovery of an
unprecedented catalogue of phages in numerous environments, from the human gut to the …

Here a virus, there a virus, everywhere the same virus?

M Breitbart, F Rohwer - Trends in microbiology, 2005 - cell.com
There are an estimated 10 31 viruses on Earth, most of which are phages that infect
bacteria. Metagenomic analyses have shown that environmental viral communities are …

Extraordinary diversity of viruses in deep‐sea sediments as revealed by metagenomics without prior virion separation

X Zheng, W Liu, X Dai, Y Zhu, J Wang… - Environmental …, 2021 - Wiley Online Library
Our current knowledge of the virosphere in deep‐sea sediments remains rudimentary. Here
we investigated viral diversity at both gene and genomic levels in deep‐sea sediments of …

[HTML][HTML] Metagenomic approaches to assess bacteriophages in various environmental niches

S Hayes, J Mahony, A Nauta, D Van Sinderen - Viruses, 2017 - mdpi.com
Bacteriophages are ubiquitous and numerous parasites of bacteria and play a critical
evolutionary role in virtually every ecosystem, yet our understanding of the extent of the …

Dark matter of the biosphere: the amazing world of bacteriophage diversity

GF Hatfull - Journal of virology, 2015 - Am Soc Microbiol
Bacteriophages are the most abundant biological entities in the biosphere, and this dynamic
and old population is, not surprisingly, highly diverse genetically. Relative to bacterial …

Methods for the isolation of viruses from environmental samples

KE Wommack, KE Williamson, RR Helton… - … : methods and protocols …, 2009 - Springer
Viruses are omnipresent and extraordinarily abundant in the microbial ecosystems of water,
soil, and sediment. In nearly every reported case for aquatic and porous media …

The viriosphere, diversity, and genetic exchange within phage communities

E Hambly, CA Suttle - Current opinion in microbiology, 2005 - Elsevier
Natural phage communities are reservoirs of the greatest uncharacterized genetic diversity
on Earth. Yet, identical phage sequences can be found in extremely different environments …

[HTML][HTML] Expanding the marine virosphere using metagenomics

CM Mizuno, F Rodriguez-Valera, NE Kimes… - PLoS genetics, 2013 - journals.plos.org
Viruses infecting prokaryotic cells (phages) are the most abundant entities of the biosphere
and contain a largely uncharted wealth of genomic diversity. They play a critical role in the …