Long noncoding RNAs in organogenesis: making the difference

P Grote, BG Herrmann - Trends in Genetics, 2015 - cell.com
A large proportion of the cellular transcriptome of higher vertebrates consists of non-protein
coding transcripts, among them the long noncoding RNAs (lncRNAs). Although lncRNAs are …

Comparative transcriptomics analyses across species, organs, and developmental stages reveal functionally constrained lncRNAs

F Darbellay, A Necsulea - Molecular biology and evolution, 2020 - academic.oup.com
The functionality of long noncoding RNAs (lncRNAs) is disputed. In general, lncRNAs are
under weak selective pressures, suggesting that the majority of lncRNAs may be …

lncRNAs in development and differentiation: from sequence motifs to functional characterization

F Constanty, A Shkumatava - Development, 2021 - journals.biologists.com
The number of long noncoding RNAs (lncRNAs) with characterized developmental and
cellular functions continues to increase, but our understanding of the molecular mechanisms …

The functions of long noncoding RNAs in development and stem cells

RBT Perry, I Ulitsky - Development, 2016 - journals.biologists.com
Eukaryotic genomes are pervasively transcribed, with tens of thousands of RNAs emanating
from uni-and bi-directional promoters and from active enhancers. In vertebrates, thousands …

LncRNAs in vertebrates: advances and challenges

AC Mallory, A Shkumatava - Biochimie, 2015 - Elsevier
Beyond the handful of classic and well-characterized long noncoding RNAs (lncRNAs),
more recently, hundreds of thousands of lncRNAs have been identified in multiple species …

Non-coding RNA expression, function, and variation during Drosophila embryogenesis

IE Schor, G Bussotti, M Maleš, M Forneris, RR Viales… - Current Biology, 2018 - cell.com
Long non-coding RNAs (lncRNAs) can often function in the regulation of gene expression
during development; however, their generality as essential regulators in developmental …

Identification and functional analysis of long non-coding RNAs in mouse cleavage stage embryonic development based on single cell transcriptome data

K Zhang, K Huang, Y Luo, S Li - BMC genomics, 2014 - Springer
Abstract Background Long non-coding RNAs (lncRNAs) regulate embryonic development
and cell fate decision in various ways, such as modulation of chromatin modification and …

Evolution of genome-organizing long non-coding RNAs in metazoans

A Ramírez-Colmenero, K Oktaba… - Frontiers in …, 2020 - frontiersin.org
Long non-coding RNAs (lncRNAs) have important regulatory functions across eukarya. It is
now clear that many of these functions are related to gene expression regulation through …

Mechanisms of long noncoding RNA function in development and disease

SU Schmitz, P Grote, BG Herrmann - Cellular and molecular life sciences, 2016 - Springer
Since decades it has been known that non-protein-coding RNAs have important cellular
functions. Deep sequencing recently facilitated the discovery of thousands of novel …

Developmental dynamics of lncRNAs across mammalian organs and species

I Sarropoulos, R Marin, M Cardoso-Moreira… - Nature, 2019 - nature.com
Although many long noncoding RNAs (lncRNAs) have been identified in human and other
mammalian genomes, there has been limited systematic functional characterization of these …