Activation and Repression of Transcription at the Double Tandem Divergent Promoters for the xylR and xylS Genes of the TOL Plasmid of Pseudomonas putida
S Marqués, MT Gallegos, M Manzanera… - Journal of …, 1998 - Am Soc Microbiol
The xylR and xylS genes are divergent and control transcription of the TOL plasmid
catabolic pathways for toluene metabolism. Four promoters are found in the 300-bp …
catabolic pathways for toluene metabolism. Four promoters are found in the 300-bp …
Mechanisms and evolution of control logic in prokaryotic transcriptional regulation
SAFT van Hijum, MH Medema… - … and Molecular Biology …, 2009 - Am Soc Microbiol
SUMMARY A major part of organismal complexity and versatility of prokaryotes resides in
their ability to fine-tune gene expression to adequately respond to internal and external …
their ability to fine-tune gene expression to adequately respond to internal and external …
Design and development of a novel genetic probe for the analysis of repressor–operator interactions
JF Love, JR Murphy - Journal of microbiological methods, 2002 - Elsevier
While the native diphtheria tox promoter/operator (toxPO)-lacZ transcriptional fusion has
allowed initial isolation and characterization of the diphtheria toxin repressor (DtxR), the low …
allowed initial isolation and characterization of the diphtheria toxin repressor (DtxR), the low …
Transcription factor function and promoter architecture govern the evolution of bacterial regulons
JC Perez, EA Groisman - Proceedings of the National …, 2009 - National Acad Sciences
Evolutionary changes in ancestral regulatory circuits can bring about phenotypic differences
between related organisms. Studies of regulatory circuits in eukaryotes suggest that these …
between related organisms. Studies of regulatory circuits in eukaryotes suggest that these …
Transcription factor levels enable metabolic diversification of single cells of environmental bacteria
R Guantes, I Benedetti, R Silva-Rocha… - The ISME …, 2016 - academic.oup.com
Transcriptional noise is a necessary consequence of the molecular events that drive gene
expression in prokaryotes. However, some environmental microorganisms that inhabit …
expression in prokaryotes. However, some environmental microorganisms that inhabit …
Activation of the Pseudomonas TOL plasmid upper pathway operon. Identification of binding sites for the positive regulator XylR and for integration host factor protein
Expression of the Pseudomonas putida TOL plasmid upper pathway operon requires a
promoter that belongs to the-12/-24 class. Stimulation of transcription from this promoter is …
promoter that belongs to the-12/-24 class. Stimulation of transcription from this promoter is …
Machine-learning from Pseudomonas putida KT2440 transcriptomes reveals its transcriptional regulatory network
Bacterial gene expression is orchestrated by numerous transcription factors (TFs).
Elucidating how gene expression is regulated is fundamental to understanding bacterial …
Elucidating how gene expression is regulated is fundamental to understanding bacterial …
Functional domains of the TOL plasmid transcription factor XylS
N Kaldalu, U Toots, V de Lorenzo… - Journal of bacteriology, 2000 - Am Soc Microbiol
The alkylbenzoate degradation genes of Pseudomonas putida TOL plasmid are positively
regulated by XylS, an AraC family protein, in a benzoate-dependent manner. In this study …
regulated by XylS, an AraC family protein, in a benzoate-dependent manner. In this study …
Interplay between network structures, regulatory modes and sensing mechanisms of transcription factors in the transcriptional regulatory network of E. coli
Though the bacterial transcription regulation apparatus is distinct in terms of several
structural and functional features from its eukaryotic counterpart, the gross structure of the …
structural and functional features from its eukaryotic counterpart, the gross structure of the …