TG468: a text graph convolutional network for predicting clinical response to immune checkpoint inhibitor therapy
K Wang, J Shi, X Tong, N Qu, X Kong… - Briefings in …, 2024 - academic.oup.com
Enhancing cancer treatment efficacy remains a significant challenge in human health.
Immunotherapy has witnessed considerable success in recent years as a treatment for …
Immunotherapy has witnessed considerable success in recent years as a treatment for …
[HTML][HTML] IRnet: Immunotherapy response prediction using pathway knowledge-informed graph neural network
Abstract Introduction Immune checkpoint inhibitors (ICIs) are potent and precise therapies
for various cancer types, significantly improving survival rates in patients who respond …
for various cancer types, significantly improving survival rates in patients who respond …
Biological knowledge graph-guided investigation of immune therapy response in cancer with graph neural network
The determination of transcriptome profiles that mediate immune therapy in cancer remains
a major clinical and biological challenge. Despite responses induced by immune-check …
a major clinical and biological challenge. Despite responses induced by immune-check …
Unlocking the Potentials of Transcriptomics in Predicting Pan Cancer Immune Therapy Response: A Deep Learning Approach Using PHZNet
H Pan, K Yu, J Le, W Hu, T Jin - 2023 IEEE 22nd International …, 2023 - ieeexplore.ieee.org
The effectiveness of immune checkpoint blockade (ICB) therapy, a critical strategy in cancer
immunotherapy, is often limited by a high rate of primary resistance. Identifying patients …
immunotherapy, is often limited by a high rate of primary resistance. Identifying patients …
1295 Integrating drug structure and target binding affinity for improved prediction of survival in cancer patients treated with immune checkpoint inhibitors
S Kumar, F Kuperwaser, D Tracy, J Sherman… - 2023 - jitc.bmj.com
Background Immune checkpoint inhibitors (ICIs) have transformed cancer therapy, yet their
response rates remain modest, ranging from 20–40% across different cancer types. 1 There …
response rates remain modest, ranging from 20–40% across different cancer types. 1 There …
1296 Reconstructing gene expression from clinical and genetic panel data for predictions of tumor microenvironment features and response to immune checkpoint …
F Kuperwaser, S Kumar, D Tracy, J Sherman… - 2023 - jitc.bmj.com
Background The development of immune checkpoint inhibitor (ICI) therapy has
fundamentally changed the landscape of cancer treatment. While ICIs have exhibited …
fundamentally changed the landscape of cancer treatment. While ICIs have exhibited …
DeepCDR: a hybrid graph convolutional network for predicting cancer drug response
Motivation Accurate prediction of cancer drug response (CDR) is challenging due to the
uncertainty of drug efficacy and heterogeneity of cancer patients. Strong evidences have …
uncertainty of drug efficacy and heterogeneity of cancer patients. Strong evidences have …
AMU: Using mRNA Embedding in Self-Attention Network to Predict Melanoma Immune Checkpoint Inhibitor Response
Y Yin, Q Wu, Z Wang, Y Kang, X Xie - medRxiv, 2022 - medrxiv.org
Background To precisely predict drug response and avoid unnecessary treatment have
been urgent needs to be resolved in the age of melanoma immunotherapy. Deep learning …
been urgent needs to be resolved in the age of melanoma immunotherapy. Deep learning …
DrugFormer: Graph‐Enhanced Language Model to Predict Drug Sensitivity
Drug resistance poses a crucial challenge in healthcare, with response rates to
chemotherapy and targeted therapy remaining low. Individual patient's resistance is …
chemotherapy and targeted therapy remaining low. Individual patient's resistance is …
Improving anti-cancer drug response prediction using multi-task learning on graph convolutional networks
Predicting the therapeutic effect of anti-cancer drugs on tumors based on the characteristics
of tumors and patients is one of the important contents of precision oncology. Existing …
of tumors and patients is one of the important contents of precision oncology. Existing …